Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00749 ATGAGGAAATTCAGAGGCTTCAAGCTTGGTAGACGCCTGCTCCGATTCTCCATATGGGCTATCCGTAAAACCCGGATCCAAAATAGATACCATCGATTGAACTTTTCTGAGTCTGCATGCCAATCAGGGAGGACTATCTCCAAGATTGTCACATGGGGTCGCCGGTTAACTAATGGAGCAAGGTCTCTCTGCGCTTTGAAATCAGGGTCCGGTTATGTACCCTTGGAGTCAGAAGCCATGGAAGATAAGAATAAAGCTTCAGTGCCTAAGGGATATTTGGCTGTCTATGTAGGTCAAAAGGATGGTGAGTTTCACAGGGCTTTGGTACCTGTAATCTATTTCAACCATCCTTTGTTTGGTCAATTGCTAAGAGAGGCAGAAGAGGAATATGGGTTTCAACACCAAGGTGGGATTACCATTCCTTGTCAATACTCACAGTTCGAACAGGTTAAGACCCGAATTGCAGCCGGGTCAGGTAGTACTTACAGGAGATTGGCATGGAAAAGGTACTATTGA 516 0.4535 MRKFRGFKLGRRLLRFSIWAIRKTRIQNRYHRLNFSESACQSGRTISKIVTWGRRLTNGARSLCALKSGSGYVPLESEAMEDKNKASVPKGYLAVYVGQKDGEFHRALVPVIYFNHPLFGQLLREAEEEYGFQHQGGITIPCQYSQFEQVKTRIAAGSGSTYRRLAWKRYY* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00749 171 Pfam Auxin responsive protein 79 151 IPR003676 GO:0009733
Pte1g00749 171 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 79 149 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00749 Pte-Chr1 11183364 11184718 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00749 86 147 Calmodulin-binding Proteins AT3G43120 53.226 1.55e-17 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00749 K14488 - qsa:O6P43_017416 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00749 1 11183364 11184718 Pte1g00749 1 11183364 11184718 RCT