Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00747 ATGAGGAAATTCAGAGGCTTCAAGCTTGGTAGACGCCTGCTCCGATTCTCCATATGGGCTATCCGTAAAACCCGGATCCAAAATAGATACCATCGATTGAACTTTTCTGAGTCTGCATGCCAATCAGGGAGGACTATCTCCAAGATTGTCACATGGGGTCGCCGGTTAACTAATGGAGCAAGGTCTCTCTGCGCTTTGAAATCAGGGTCGGGTTATGTACCCTTGGAGTCAGAAGCCATGGAAGATAAGAATAAAGCTTCAGTGCCTAAGGGACATTTGGCTGTCTATGTAGGTCAAAAGGATGGTGAGTTTCACAGGGCCTTGGTGCCTGTAATCTATTTCAACCATCCTTTGTTTGGTCAACTGCTAAGAGAGGCAGAAGAGGAATATGGGTTTCAACACCAAGGTGGGATTACCATTCCTTGTCAATACTCACAGTTCGAACAGGTTAAGACCCGAATTGCAGCCGGGTCAGGTAGTACTTACAGGAGATTGGCATGGAAAAGGTACTATTGA 516 0.4612 MRKFRGFKLGRRLLRFSIWAIRKTRIQNRYHRLNFSESACQSGRTISKIVTWGRRLTNGARSLCALKSGSGYVPLESEAMEDKNKASVPKGHLAVYVGQKDGEFHRALVPVIYFNHPLFGQLLREAEEEYGFQHQGGITIPCQYSQFEQVKTRIAAGSGSTYRRLAWKRYY* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00747 171 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 79 149 IPR003676 GO:0009733
Pte1g00747 171 Pfam Auxin responsive protein 79 151 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00747 Pte-Chr1 11154943 11156309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00747 86 147 Calmodulin-binding Proteins AT3G43120 51.613 1.16e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00747 K14488 - qsa:O6P43_017416 248.054