Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00722 ATGGGCAGCAACACTAACAATCACAAGGAAGATCTAGATCATGATGACGAATTCCCACTTCCGGGTTTTCGTTTTCATCCAACTGATGAAGAACTTGTGGGATTTTATCTTCCTAGGAAGATTGGAAAGAAGCCTATCGGGATTGAAATTATCAAACAGATTGATATCTATAAATATGATCCTTGGGATCTTACAAAATTCAGCAGTAATATTGGGGAGAAAGAATGCTTTTTCTTTTGTAAGAGAGGGAGGAAATACAAGAACAGCATAAGGCCGAACCGAGTAACCCGATCAGGGTTCTGGAAAGCAACTGGCATAGACAAACCTGTGTATTCAAATGCAGGAGAAGGCAAAGACTGCATTGGATTCAAGAAAACATTAGTGTATTACCGGGGCAGCGCAGGTAAAGGCACGAAAACCGAATGGATGATGCATGAGTTTCGCCTTCCTTTGAATCACAGTGATCAGGCCAATCTAACTAACAAGAAGAATATCATTGCAAGCGATATCCATTTTGCTGAAATTTGGACCTTGTGCCGAATTCTCAAGCGAAACCCGTCGCAAAAAAGGTGCCTAACTAATTACAAACAATTATCAGATAAACATTCCAATGGAAAAAGCTCCAAGAGTACTTGCAATACTGTGGATTCCAACAGTGAAGAAGCATATATTGTTTTTGGAACTGATAGCCAAAGTGAATACTTCTGGGACAATAAACCTGTGATTAGCTATTGTGATCGAAGGAATGATCAGTTTTCTGTAGGTGAAAATTTGAACTTACCAGTAACAACGACGCAGCCTCAACCAGCTGCAACTTTTTCATCAGATTCTGGAATTTGGATTGATCAAAATAATGCTGGTGGTTTCTTCCCATATGATGATAATTGGGATGACTTTGAATCAATACTGGAATTGAATCAACATGGATCTTCTTTTCATGTTAATAACTATTAG 954 0.3878 MGSNTNNHKEDLDHDDEFPLPGFRFHPTDEELVGFYLPRKIGKKPIGIEIIKQIDIYKYDPWDLTKFSSNIGEKECFFFCKRGRKYKNSIRPNRVTRSGFWKATGIDKPVYSNAGEGKDCIGFKKTLVYYRGSAGKGTKTEWMMHEFRLPLNHSDQANLTNKKNIIASDIHFAEIWTLCRILKRNPSQKRCLTNYKQLSDKHSNGKSSKSTCNTVDSNSEEAYIVFGTDSQSEYFWDNKPVISYCDRRNDQFSVGENLNLPVTTTQPQPAATFSSDSGIWIDQNNAGGFFPYDDNWDDFESILELNQHGSSFHVNNY* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00722 317 SUPERFAMILY NAC domain 20 183 IPR036093 GO:0003677|GO:0006355
Pte1g00722 317 Pfam No apical meristem (NAM) protein 21 149 IPR003441 GO:0003677|GO:0006355
Pte1g00722 317 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 20 221 - -
Pte1g00722 317 Gene3D NAC domain 28 188 IPR036093 GO:0003677|GO:0006355
Pte1g00722 317 ProSiteProfiles NAC domain profile. 19 184 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00722 Pte-Chr1 10026140 10027877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00722 11 184 NAC Transcription Factor Family AT5G39820 54.098 4.02e-65 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte1g00722 NAM 1.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00722 - - gmx:100808692 305.064