Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00721 ATGGGTGTGGGAGGCAATTTCTGGGACTTTTTGAAACCTTATGCTAGAAACGAAGGTTTTGATTTCTTGAGGAACAAACGTGTTGCTGTCGACCTTTCTTTCTGGATTGTTCAACATGAGAATGCCATCAAGGGTTTTGCTCGAAAACCCCACATACGACTTACCTTCTTTCGCACCATCCACCTCTTCTCTAAATTTGGAGCATTCCCAGTCTTCGTTTTGGACGGGACTCCATCACCGTTAAAATCACAAGCACGGATTGCAAGATTCTATCGTTTATCAGGAATTGAACTACCAAGCTTAAGGGAAGCCGGAGAAGGTATATCAGTGGAGAGGAACCATGCGTTTACAAAATGTGTGCACGAATGTGTGGAACTACTGGAGCTGCTTGGGATGCCTGTGCTTAGGGCAAAAGGTGAAGCTGAGGCACTCTGTGCACAACTAGATCATGAAGGTCAAGTGGATGCTTGCATCACAACAGACAGCGATGCATTCCTCTTTGGAGCTAAATGTGTTATAAAATGTATACGTCCTAATTGCAGCGAACCGTTTGAATGCTACCACTTGTCAGATATTGAAGCTGGTCTTGGATTGAAGAGGAAGCACTTCATAGCTATTTCTCTTTTGGTTGGAAATGACCATGATCTAGCTGGTGTTCCTGGGATTGGGCTCGAGACAGCTCTTCGTTTTGTCCAGAATTACAGTGAAGAAGATGTGTTAAACAGGTTATGTGAGATAGGAAAGGGCGACACTTCATGCAGTGGCATCAAACCTATTGTTGATCCGGATGAAACGTCGCCTACTATAAAACAGTCTCATTGTTCCTTCTGCGGGCATCCTGGCAGTAAAAGTGCTCATATAAAGATTCCCTGTAGATATTGCAAAGTAGAAACTAATGCTGGTTGTGTAAAAAAGCCTAAGGGTTTTCGATGTGATTGCTGCTCTTGTGACAGGATTTCAAAACTAAAGGAGCAGAAAAAGCAAGAAAACTGGCAAATAAAGATTTGCAGCAAGATTGCTACTCAGCAAAATTTTCCCAATGATAAACTCATTGAGATGTATTTGTGCAATGACAATGCAAAGGAGGAACCTTGCATCTCATGGGGAAGCCCAAACACTGAAATGCTTGTTGATTTCTTAAGTTTTCATCAAAACTGGGAGCCTTCTTACATTAGGAAGAGATTGTTTCCTATATTGTCCACCTTGTTTCTGAGAGCCAATGGTACCAAATCAGTGAAAAATTCATTGCTTGAGCAATATGAGTTCGATTCAGTGAAACGTGTAAAGGTGAGATATGGGCATCAATTTTACGTGGTCAAATGGAAACATGCAAGGGGAAGCGTTACCCGTGGCATTCCATCTATGAAGTCTCCTGGTCAACATGAAGATGTTGAGGAGAGCGATTTATTTGAAGATTTTAGTGGGGTTGATGAAGCAGGCAATGAACTGTACGAGTGTGATGTGCCTGAGACTTTTGTTGATGAGGAAGATATCTTTCTATTGACAGATGAAAACATGGATCTACTAAATGCTGCTTTCCCTGAAGCTGTTGACAAATTTTGGCAGGAACAGGAGCTAAAAGAATTGAAGAGGAAAAAGAAATCAAGGTGTGAATCAGAAGGAAAATCCAAGCGAGGATGTACTCAGCTAAACATCACAGAATTCTACCCTGTCACGAAAGTGGGATGTCAGTCAAAACTGGAAAACCAGCTTGTCACGAGTGCAGATAGCCATGGTGATAAAACTTCTCCTAAGGCTAAGACAAAGGTGTCAAGTCAGCTTGCCATGAGTGCAGATAACCATGCTGATGACACTTCTTCTAAAGCCAAGACAAAGGTGACAAGTCCAAATCTTCCAAAATCTGTGAGGCGTCGCCTTTTATTTGACTAG 1890 0.4212 MGVGGNFWDFLKPYARNEGFDFLRNKRVAVDLSFWIVQHENAIKGFARKPHIRLTFFRTIHLFSKFGAFPVFVLDGTPSPLKSQARIARFYRLSGIELPSLREAGEGISVERNHAFTKCVHECVELLELLGMPVLRAKGEAEALCAQLDHEGQVDACITTDSDAFLFGAKCVIKCIRPNCSEPFECYHLSDIEAGLGLKRKHFIAISLLVGNDHDLAGVPGIGLETALRFVQNYSEEDVLNRLCEIGKGDTSCSGIKPIVDPDETSPTIKQSHCSFCGHPGSKSAHIKIPCRYCKVETNAGCVKKPKGFRCDCCSCDRISKLKEQKKQENWQIKICSKIATQQNFPNDKLIEMYLCNDNAKEEPCISWGSPNTEMLVDFLSFHQNWEPSYIRKRLFPILSTLFLRANGTKSVKNSLLEQYEFDSVKRVKVRYGHQFYVVKWKHARGSVTRGIPSMKSPGQHEDVEESDLFEDFSGVDEAGNELYECDVPETFVDEEDIFLLTDENMDLLNAAFPEAVDKFWQEQELKELKRKKKSRCESEGKSKRGCTQLNITEFYPVTKVGCQSKLENQLVTSADSHGDKTSPKAKTKVSSQLAMSADNHADDTSSKAKTKVTSPNLPKSVRRRLLFD* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00721 629 SMART xpgn3 1 96 IPR006085 GO:0004518
Pte1g00721 629 MobiDBLite consensus disorder prediction 573 629 - -
Pte1g00721 629 Gene3D - 198 259 - -
Pte1g00721 629 Pfam XPG N-terminal domain 1 87 IPR006085 GO:0004518
Pte1g00721 629 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 585 IPR006084 -
Pte1g00721 629 CDD PIN_GEN1 2 202 - -
Pte1g00721 629 Pfam XPG I-region 131 213 IPR006086 GO:0004518
Pte1g00721 629 SUPERFAMILY PIN domain-like 6 213 IPR029060 -
Pte1g00721 629 MobiDBLite consensus disorder prediction 586 602 - -
Pte1g00721 629 SMART xpgineu 128 198 IPR006086 GO:0004518
Pte1g00721 629 FunFam Flap endonuclease GEN-like 1 2 197 - -
Pte1g00721 629 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 127 144 IPR006084 -
Pte1g00721 629 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 25 39 IPR006084 -
Pte1g00721 629 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 203 218 IPR006084 -
Pte1g00721 629 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 70 89 IPR006084 -
Pte1g00721 629 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 148 168 IPR006084 -
Pte1g00721 629 FunFam Flap endonuclease GEN-like 1 198 256 - -
Pte1g00721 629 Gene3D - 3 197 - -
Pte1g00721 629 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 198 405 IPR036279 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00721 16 243 Core DNA Replication Machinery Family AT5G26680 30.242 7.62e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00721 K15338 - jre:108998295 739.569