Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00718 ATGGCAGGAGCTGAACCTCCTAAAGATTATTCTAGTCCCACTGATCAAAACACCATCACCACCATAGCTGCAGCCACTAACAACTGTACTATCAATCAATTGCAAACCCAAAAATCCAGACGTAGGTTTGTTGGAGTGAGACAAAGGCCATCTGGAAGGTGGGTTGCAGAGATCAAAGAATCTTCGCAACGTGTCAGATTATGGCTCGGAACTTATGACACCCCAGAAGAAGCAGCTAGGGCCTATGATGAAGCCGCTCGTGCCTTGCGAGGTGAAAATGCTAGAACTAACTTCAACCAAGTGAATGATAACCCCAGCCAACAGGTTTCAATTCTTCCCAATGGAGATATTGCTGGTTCTGCAGAATCTTCAGCTTCTGATGGGAGACATGGCTTAAGCTTCTCGTCCTTGAAAGCCAAATTGAGCAAGAACCTTCAGAGTATCATGGCTAGGGCAAGTGATCAGAACAAGTCCTCAAAATCTAGGGTAAGTGATCATTTCACTTTTGCTAGTATTTTTCATCGCAGAAATTTCCAATACCGAAATCCGCCTTTGGATTTGAAGAACGTTGAGAACGCAGTCCAACCAAGCATCATCGTGCCACCGACAGAAAGTGACCCTGTCTATTGGGAAAACTCCAGTATTTCTGATTGTAGCTCTGAGTGGATGGGATTCAGATCACAAGGTAGTGCTGGTTTCGATTCTGATGGTGGTTCAGAAATAGGGGAAGTAGGTATTGGTGATCATCAAGGATTTCCTAACCAAATAATGGGGTGGATTGATGGACCTGAGATTTGCCCTAGTACAAATGAAGGTTCGAGCAGTAAGAGGTTCAAGGTTTCTTCTTCAATGATGGTGCCTTCAACTTTCAGTCGTTCTCCATTGTATGATGGGGGCTGCGTCTCTCCTTACAGTTCTTGCGGCTCTCCTTACAGTTCTTGTGGTTCACCATGTAATGGTTATGGTTCACCATACATGAATAGGTATCAAAACTGA 996 0.4438 MAGAEPPKDYSSPTDQNTITTIAAATNNCTINQLQTQKSRRRFVGVRQRPSGRWVAEIKESSQRVRLWLGTYDTPEEAARAYDEAARALRGENARTNFNQVNDNPSQQVSILPNGDIAGSAESSASDGRHGLSFSSLKAKLSKNLQSIMARASDQNKSSKSRVSDHFTFASIFHRRNFQYRNPPLDLKNVENAVQPSIIVPPTESDPVYWENSSISDCSSEWMGFRSQGSAGFDSDGGSEIGEVGIGDHQGFPNQIMGWIDGPEICPSTNEGSSSKRFKVSSSMMVPSTFSRSPLYDGGCVSPYSSCGSPYSSCGSPCNGYGSPYMNRYQN* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00718 331 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Pte1g00718 331 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Pte1g00718 331 SMART rav1_2 42 106 IPR001471 GO:0003700|GO:0006355
Pte1g00718 331 SUPERFAMILY DNA-binding domain 43 99 IPR016177 GO:0003677
Pte1g00718 331 Pfam AP2 domain 42 91 IPR001471 GO:0003700|GO:0006355
Pte1g00718 331 CDD AP2 42 101 IPR001471 GO:0003700|GO:0006355
Pte1g00718 331 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 28 161 - -
Pte1g00718 331 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
Pte1g00718 331 MobiDBLite consensus disorder prediction 95 129 - -
Pte1g00718 331 Gene3D AP2/ERF domain 41 101 IPR036955 GO:0003700|GO:0006355
Pte1g00718 331 FunFam ethylene-responsive transcription factor RAP2-11 41 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00718 Pte-Chr1 9984430 9985425 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00718 35 107 AP2-EREBP Transcription Factor Family AT5G19790 61.644 1.77e-25 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte1g00718 AP2 1.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00718 K09286 - qsa:O6P43_017554 343.969