Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00708 ATGAAGTTCGTGCCTTCGATGAGTTTCGGAGAATTTCTAGACAACGACTCCGGTGGTGGCGGTGCTAGAATAGTAGCTGATATATCTTACGGTGACAGTGACAACAGCAACGACATGCCCTCTGGTGCAATCTCACACCCACACTTGGTTATACCGACTGTGGCCAAATCTGTGTTCCACTCTCCTGGACTCTCACTTGGACTTCAAACGAATGTCGATGGACAAGGGGAAATGGCGAGAGTGGGTGAGAACTATGAACGAATTGTTGGGAGAAGGAGCAGAGAGGAAGAACACGAAAGCAGATCCGGAAGTGACAACGTTGATGGTGTTTCAGGTGATGATCAGGACGCTGTGGACGAGCCCCCCAGAAAAAAGCGATATCACAGACACACTCCTCAACAAATCCAAGAGCTAGAAGCTCTTTTCAAGGAGTACCCCCATCCTGATGAGAAGCAAAGGTTGGAACTCGGCAGACGGCTTTGCTTGGAAACAAGACAGGTTAAGTTTTGGTTTCAAAATCGAAGAACACAGATGAAGACTCAATTGGAACGCCATGAGAACTCTTTGCTTAGAGCTGATAATGATAAGCTTAGAGCTGAGAACATGTCAATCAGAGGAGCAATGAGGAATCCAATTTGCTCAAACTGTGGAGGTCCTGCTATCATTGGTGAGGTTTCACTAGAAGAGCAGCACCTTAGAATTGAGAATGCGAGGTTGAAAGATGAGTTAGACCGGGTTTGTGGACTAGCAGGCAAGTTCTTAGGCCGTCCTATTTCTTCATTGTCTAGTCCAATCGGTCATTCGTTACCAAATTCAAGTTTGGACCTAGGAGTTGGTAATAATGGTTTTGGTGGTATGAGTACTGTAGCTACAACATTGCCGTTAGGGCTTGATTTTGGTGTTGGAATATCAAATGGTTTACCTCTGGTATCACCAACTAGACCATCATCAGCTGCTGTGACTAGCTTTGATAGATCAATTGAGAGGTCTATGTATTTGGAACTTGCCTTAAATGCAATGGATGAATTGTTCAAAATGGCACAAACCGATGAGCCCCTTTGGGTTCGAAGTATAGATGGAAGGTGCATTTTGAACCATGAGGAGTACATGAGAACATTCACCCCTTGTATTGGTTTGAAACCCAATGGTTTTGTCACTGAGGCCTCTAGAGAGACGGGCATGGTGATCACCAACAGCTTGGCCTTAGTTGAAACCTTGATGGACTCGAATCGATGGGCAGAGATGTTTCCTTCTATTATTGGCAGAAGCTCTACTACAGATGTGATATCTAGTGGAATGGGTGGAACAAGAAATGGTGCACTTCAACTGATGCATGCTGAACTGCAAGTTCTTTCTCCTTTTGTTCCTGTTCGCGAGGTCAATTTCCTAAGGTTCTGCAAGCAGCATGCAGAGGGCATCTGGGCTGTGGTAGATGTGTCCATTGAAATTCTTAGGGAAAATTCCGGTGCACCGACATGTCTGAACTGTAGGAGGCTTCCTTCTGGTTGTGTGGTGCAAGATATGCCCAATGGCTATTCTAAAGTGACTTGGGTTGATCATACGGAATATGATGAAAGCCAAGTCCACCAACTCTACCGGCCATTGTTAAGTTCAGGCATGGGTTGTGGTGCACAGCGTTGGGTGGCCACTCTCCAACGCCAATGTGAAGGCCTAGCTATCTTAATGTCTTCCACTGTCCCCACCCGTGACCACACAGCCATTACAGCAAGTGGGAGACGAGGCATGCTGAAGCTTGCACAACGAATGACAGACAACTTCTGTGCAGGAGTCTCTGCATCAACAGTACACAAATGGAACAAGCTCAACACCGGGAATGTCGACGAGGATGTTCGTGTCATGACACGGAAGAGTGTTGATGACCCTGGCGAGCCACCGGGGATTGTGTTAAGTGCAGCCACCTCTGTATGGCTTCCAGTCTCTCCGCAACGACTGTTTGATTTCTTGCGTGACGAGCGGCTCAGAAGTAAATGGGATATCCTCTCCAATGGTGGCCCTATGCAGGAAATGGCTCATATTGCTAAAGGCCAAGACCAAGGCAACTGCGTCTCTCTCTTGCGTGCCAGTGCTATGAATGCAAACCAAAGCAGTATGCTAATACTACAGGAGACATGCATCGACTCAGCTGGTTCTCTCGTGGTGTATGCTCCGGTTGATATACCAGCCATGCATGTGGTGATGAACGGTGGTGATTCTGCATATGTGGCCCTTCTACCATCTGGGTTCGCCATCGTCCCAGATGGACCTGGTTCAAACTTGGCTCCCACAGGCAACAACAACAATGGAAGGACCGATTGCAATGGAGGCTCTCTTCTTACAGTGGCATTTCAGATACTAGTGAACAACCTTCCTACGGCTAAGCTCACTGTTGAGTCAGTGGAGACAGTGAACAATCTCATCTCATGCACCGTGCAGAAAATCAAGGCTGCTCTTCCTTGTGAAAGCTGA 2466 0.4724 MKFVPSMSFGEFLDNDSGGGGARIVADISYGDSDNSNDMPSGAISHPHLVIPTVAKSVFHSPGLSLGLQTNVDGQGEMARVGENYERIVGRRSREEEHESRSGSDNVDGVSGDDQDAVDEPPRKKRYHRHTPQQIQELEALFKEYPHPDEKQRLELGRRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRADNDKLRAENMSIRGAMRNPICSNCGGPAIIGEVSLEEQHLRIENARLKDELDRVCGLAGKFLGRPISSLSSPIGHSLPNSSLDLGVGNNGFGGMSTVATTLPLGLDFGVGISNGLPLVSPTRPSSAAVTSFDRSIERSMYLELALNAMDELFKMAQTDEPLWVRSIDGRCILNHEEYMRTFTPCIGLKPNGFVTEASRETGMVITNSLALVETLMDSNRWAEMFPSIIGRSSTTDVISSGMGGTRNGALQLMHAELQVLSPFVPVREVNFLRFCKQHAEGIWAVVDVSIEILRENSGAPTCLNCRRLPSGCVVQDMPNGYSKVTWVDHTEYDESQVHQLYRPLLSSGMGCGAQRWVATLQRQCEGLAILMSSTVPTRDHTAITASGRRGMLKLAQRMTDNFCAGVSASTVHKWNKLNTGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSKWDILSNGGPMQEMAHIAKGQDQGNCVSLLRASAMNANQSSMLILQETCIDSAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSNLAPTGNNNNGRTDCNGGSLLTVAFQILVNNLPTAKLTVESVETVNNLISCTVQKIKAALPCES* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00708 821 CDD START_ArGLABRA2_like 329 556 - -
Pte1g00708 821 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 120 817 IPR042160 -
Pte1g00708 821 SMART START_1 334 557 IPR002913 GO:0008289
Pte1g00708 821 MobiDBLite consensus disorder prediction 75 132 - -
Pte1g00708 821 Pfam Homeodomain 124 179 IPR001356 GO:0003677
Pte1g00708 821 SUPERFAMILY Bet v1-like 327 557 - -
Pte1g00708 821 CDD homeodomain 123 181 IPR001356 GO:0003677
Pte1g00708 821 Pfam START domain 334 556 IPR002913 GO:0008289
Pte1g00708 821 MobiDBLite consensus disorder prediction 84 104 - -
Pte1g00708 821 Gene3D - 111 195 - -
Pte1g00708 821 ProSiteProfiles 'Homeobox' domain profile. 121 181 IPR001356 GO:0003677
Pte1g00708 821 Coils Coil 175 202 - -
Pte1g00708 821 FunFam Homeobox-leucine zipper protein GLABRA 2 334 556 - -
Pte1g00708 821 ProSiteProfiles START domain profile. 325 560 IPR002913 GO:0008289
Pte1g00708 821 FunFam Homeobox-leucine zipper protein HDG1 111 197 - -
Pte1g00708 821 SMART HOX_1 122 185 IPR001356 GO:0003677
Pte1g00708 821 SUPERFAMILY Bet v1-like 584 814 - -
Pte1g00708 821 SUPERFAMILY Homeodomain-like 109 181 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00708 Pte-Chr1 9756264 9762641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00708 7 821 Homeobox Transcription Factor Family AT3G61150 65.348 0.0 1037
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte1g00708 START 3.3e-55 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00708 K09338 - qsu:111991611 1349.34