Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00707 ATGAACAATATGATGCGTAGGCTGAAGAGCATTGCATCGGGGAGGACATCTATATCATCAGATCCTGGTGGTGATTCCATCACAAAGAGGGCTAAGTTTGATCTAGAAGAACAGAAGTTTAATACGGATCCATCCCATCCTGAAAGCAGTGGTGTATTTCAAGAGCAGTGCTCAGAAGAAACTACTGCAGGCACGTCCAATCAATCTGATCAACTTCCGAAAGAATTGGATGAAATGAAAATTAGGGATGAAAGAAGCTACAAAAATAATGGAAAGGATATGGAGACAGGCTTTGTCACTGGTAATGGAACTGAACCTGGTCAGATAATTACGACTGCAGTGGCTGGTCGAGATGGACAGCCAAAACAGACAATCTCTTACGTGGCAGAACGTATTGTTGGAACTGGTTCGTTTGGAGTTGTTTTTCAGGCTAAGTGTCTTGAAACTGGTGCAGCAGTTGGCATAAAGAAAGTGTTGCAGGACAAGAGATTTAAAAATAGGGAACTCCAGATTATGCGAATGCTTGATCATCCTAACATTGTTCAACTGAAACATTGTTTCTTTTCAACTACTGAAAAAGATGAGGTGTACCTTAACTTAGTAATGGAGTATATATCTGAAACTGTTTATAGAGTTTCCAAACATTATGCCAGGATGCACCAGCATATGCCTATGATTTATGTGCAGCTGTATACATACCAGATATGCCGCGGTCTTAATTACTTGCATCATGTTGTTGGTGTGTCACATCGAGATATTAAGCCACAAAATTTACTGGTCGATCCCCACACTCACGAGCTAAAGATATGTGACTTTGGTAGTGCAAAGATGTTGGTTCCAGGTGAACCAAACATAGCGTATATATGCTCTCGCTATTACAGGGCTCCTGAACTTATATTTGGGGCTACAGAATATACAAATGCTATTGATATGTGGTCAGTTGGTTGTGTTTTGGCAGAGCTCCTTCTAGGACAGCCTTTGTTTCCAGGGGAGAGTGGGGTTGATCAGCTTGTGGAAATTATTAAGATTCTGGGGACTCCAACCAGAGAAGAGATTAAGTGTATGAATCCGAATTACACTGAATTTAAGTTCCCTCAAATTAAGGCTCACCCATGGCACAAGGTTTTCCAAAAGAGAATGCCTCCTGAAGCAGTGGATCTTGTGTCGAGGCTTCTGCAGTATTCACCAAATTTGCGCTGCACTGCTGTAAGTAGTTGTTTTTGCTAG 1227 0.4148 MNNMMRRLKSIASGRTSISSDPGGDSITKRAKFDLEEQKFNTDPSHPESSGVFQEQCSEETTAGTSNQSDQLPKELDEMKIRDERSYKNNGKDMETGFVTGNGTEPGQIITTAVAGRDGQPKQTISYVAERIVGTGSFGVVFQAKCLETGAAVGIKKVLQDKRFKNRELQIMRMLDHPNIVQLKHCFFSTTEKDEVYLNLVMEYISETVYRVSKHYARMHQHMPMIYVQLYTYQICRGLNYLHHVVGVSHRDIKPQNLLVDPHTHELKICDFGSAKMLVPGEPNIAYICSRYYRAPELIFGATEYTNAIDMWSVGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFQKRMPPEAVDLVSRLLQYSPNLRCTAVSSCFC* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00707 408 Gene3D Phosphorylase Kinase; domain 1 111 206 - -
Pte1g00707 408 FunFam Shaggy-related protein kinase kappa 207 408 - -
Pte1g00707 408 CDD STKc_GSK3 122 406 IPR039192 -
Pte1g00707 408 MobiDBLite consensus disorder prediction 44 72 - -
Pte1g00707 408 ProSiteProfiles Protein kinase domain profile. 127 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00707 408 Pfam Protein kinase domain 127 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00707 408 MobiDBLite consensus disorder prediction 85 104 - -
Pte1g00707 408 MobiDBLite consensus disorder prediction 1 76 - -
Pte1g00707 408 Gene3D Transferase(Phosphotransferase) domain 1 207 406 - -
Pte1g00707 408 MobiDBLite consensus disorder prediction 1 24 - -
Pte1g00707 408 SMART serkin_6 127 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00707 408 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 93 407 - -
Pte1g00707 408 MobiDBLite consensus disorder prediction 27 43 - -
Pte1g00707 408 SUPERFAMILY Protein kinase-like (PK-like) 126 403 IPR011009 -
Pte1g00707 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Pte1g00707 408 FunFam Glycogen synthase kinase-3 beta 111 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00707 Pte-Chr1 9738247 9742527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00707 133 402 Core Cell Cycle Gene Families AT1G76540 35.125 1.31e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pte1g00707 Pkinase 9.2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00707 K27414 - qsa:O6P43_017567 685.256