Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00702 ATGCCTAGTGGTACCCTTGAAGTTTTTCTAGTCAGTGCAAAGGGACTTGACAACGATGACTTTCTCACCAACATAGATCCCTACGTGATTCTGACACACCGGACTCAAGAGCACAAAAGCAATGTGATCTCAGGTGCAGGGTCTAATCCAGAATGGAATGAAAGTTTCCTGTTCACCATCCAAGGTGATGTTTCAGAACTCAGATTAAAGATCATGGACAAGGATAACTCTAACAGTGATGATTTTCTGGGGGAGGCCATTATTCCAATAGAGCCAGTTATCTATGAAGGAACTGTTCCAAACACTGCATATAACGTTGTGAAGGATGACGAATATCGTGGCGAAATCAGGGTGTCCCTCACTTTCACTCCGGAGTTCCCAACAGAAGGCAGTGTAGCTGAGGAAGAAAGCTATGGCGGATGGAAGGAGCCATCAGATTACTAA 444 0.4459 MPSGTLEVFLVSAKGLDNDDFLTNIDPYVILTHRTQEHKSNVISGAGSNPEWNESFLFTIQGDVSELRLKIMDKDNSNSDDFLGEAIIPIEPVIYEGTVPNTAYNVVKDDEYRGEIRVSLTFTPEFPTEGSVAEEESYGGWKEPSDY* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00702 147 MobiDBLite consensus disorder prediction 125 147 - -
Pte1g00702 147 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 125 IPR035892 -
Pte1g00702 147 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Pte1g00702 147 Gene3D C2 domain 2 125 IPR035892 -
Pte1g00702 147 Pfam C2 domain 4 104 IPR000008 -
Pte1g00702 147 SMART C2_3c 5 102 IPR000008 -
Pte1g00702 147 PANTHER C2 DOMAIN-CONTAINING 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00702 Pte-Chr1 9598479 9673729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00702 4 94 C2H2 Transcription Factor Family AT4G21160 32.967 2.23e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00702 - - egr:104443785 204.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00702 1 9598479 9673729 Pte1g00702 1 9598479 9673729 RCT