Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte1g00692 | ATGGCATTCACAGGAACTCTTGACAAATGCAAGGCTTGTGACAAGACTGTCTATGTTGTCGACATGTTGTCTCTTGAAGGGATTCCTTACCATAAAACCTGCTTCAAGTGTACTCACTGCAAAGGAAATCTGACCATGAATAGCTACTCCTCCATGGATGGAGTCCTCTACTGCAGGCCACATTTTGAGCAGCTCTTCAAAGAATCTGGAAACTTCAGCAAGAATTTCCAGACAGGTAAGCTAACAAACCACAGACTCTCTTCAATGTTCAGTGGAACCCAGGACAAATGTTCAGTTTGCTCAAAAACAGTTTATCCACTGGAAAAGGTGACTCTGGAAGGTGAATGTTTCCACAAGTCCTGCTTTAGGTGTGCTCATGCAGGCTGTCCTCTGACACATTCTTCCTATGCTGCTCTTGATGGTGTCCTCTACTGCAAGCACCATTTTGCTCAACTCTTCATGGAGAAAGGAAACTACAAGCATGTACTCCAGGCTGCTGCAAACAGGAAGAATGCCACGCCACCTCCTGAACCAGCTGACCAGCCAGAGGGAGAGACTGTAGAAGGTGCAGCTGAAGGTGTCGCTGAAAATGCAAAAGGTGGGGATGGGGAAGAAGCTGCAGCGGAAGGTGCAGAAGGTGAAGAGCACAAGTCAGAAGAACAACCTACAGAAGAGCAGTCTTAA | 684 | 0.4678 | MAFTGTLDKCKACDKTVYVVDMLSLEGIPYHKTCFKCTHCKGNLTMNSYSSMDGVLYCRPHFEQLFKESGNFSKNFQTGKLTNHRLSSMFSGTQDKCSVCSKTVYPLEKVTLEGECFHKSCFRCAHAGCPLTHSSYAALDGVLYCKHHFAQLFMEKGNYKHVLQAAANRKNATPPPEPADQPEGETVEGAAEGVAENAKGGDGEEAAAEGAEGEEHKSEEQPTEEQS* | 228 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte1g00692 | 227 | Gene3D | Cysteine Rich Protein | 5 | 72 | - | - | |
Pte1g00692 | 227 | ProSitePatterns | LIM zinc-binding domain signature. | 10 | 44 | IPR001781 | - | |
Pte1g00692 | 227 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 2 | 35 | - | - | |
Pte1g00692 | 227 | ProSiteProfiles | LIM domain profile. | 95 | 155 | IPR001781 | - | |
Pte1g00692 | 227 | MobiDBLite | consensus disorder prediction | 198 | 227 | - | - | |
Pte1g00692 | 227 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 123 | 162 | - | - | |
Pte1g00692 | 227 | Pfam | LIM domain | 97 | 152 | IPR001781 | - | |
Pte1g00692 | 227 | Pfam | LIM domain | 10 | 65 | IPR001781 | - | |
Pte1g00692 | 227 | MobiDBLite | consensus disorder prediction | 167 | 227 | - | - | |
Pte1g00692 | 227 | SMART | lim_4 | 9 | 61 | IPR001781 | - | |
Pte1g00692 | 227 | SMART | lim_4 | 96 | 148 | IPR001781 | - | |
Pte1g00692 | 227 | FunFam | LIM domain and actin-binding 1 | 4 | 74 | - | - | |
Pte1g00692 | 227 | ProSiteProfiles | LIM domain profile. | 8 | 68 | IPR001781 | - | |
Pte1g00692 | 227 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 89 | 122 | - | - | |
Pte1g00692 | 227 | CDD | LIM1_SF3 | 6 | 68 | - | - | |
Pte1g00692 | 227 | PANTHER | OS06G0237300 PROTEIN | 6 | 78 | - | - | |
Pte1g00692 | 227 | Gene3D | Cysteine Rich Protein | 91 | 161 | - | - | |
Pte1g00692 | 227 | FunFam | LIM domain and actin-binding 1 | 91 | 161 | - | - | |
Pte1g00692 | 227 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 36 | 76 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte1g00692 | Pte-Chr1 | 9320206 | 9321488 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LIM | Pte1g00692 | LIM | 1.4e-10 | CL0167 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte1g00692 | - | K09377 | qsa:O6P43_027214 | 345.125 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pte1g00692 | 1 | 9320206 | 9321488 | Pte1g00692 | 1 | 9320206 | 9321488 | RCT |