Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00686 ATGGGAAGGACACCCTGCTGTGACAAGAAAGGTTTGAAAAAAGGGCCATGGACACCTGAAGAAGATGAGCTACTTGTTAATTACATTCAGAAAAATGGTGGCCATGGAAGCTGGCGTTCCCTCCCCAAGATGGCAGGTCTTCTACGCTGTGGCAAGAGTTGCAGGCTTAGATGGACAAACTATCTTAGACTAGACATAAAAAGAGGTCCGTTTACTGTTGAAGAAGAAAAACTTGTCATACAGCTTCATGGCATTCTTGGAAATAGGTGGGCTGCCATTGCCTCTCAATTGTCAGGTAGAACTGACAATGAGATAAAGAATTTATGGAACACTCACTTGAAGAAACGCCTGATTGGTATGGGACTTGACCCTCAAACACATGAGCCCTTCAGCTCTCACTGTGCCGCTACTGTCAAGGCACCAACATCCCCTTCCACTAGACACATGGCGCAGTGGGAAAGTGCAAGGCTTGAAGCTGAGGCTCGGCTTTCGAGGGAGTCATCACTCTTCAATAATCCAACCTTTAGCAAAAGTGCTGCTGCCGATGCTGATGACTTCTTTCTGCGCATGTGGAACTCTGAAGTTGGTGAAGCATTCAGAAGAGTGAAATGTGCAGATACTAGTGTTACTTGCCAGAGTCCAATTTCTCAGAGTTCAACCTCAACCAAATGTGGATCACGATCGGTGTCTGCCATTACAACTGAAGTTGTCACTAACCTAACAGCACCCCCAGCCACTGATAGCAATCAAAAGGAAGTTGTGGAAGGTAAAAACCACAAGTTATATGTAGAGGATGTCATGGTTGGATCTGATTCATCAAGCTCCAATGACTTGGAGAATTCGTCAGACAATGCATTGCAGTTGCTTTTGGACTTCCCTATCAACAATGACATGAGCTTCTTTGAAAGCAATTTTGACAAGTATACGACAACTTCAGCCTTGCTACTTGACAACTCTTTCATTAGCTCCTTCTGA 975 0.4472 MGRTPCCDKKGLKKGPWTPEEDELLVNYIQKNGGHGSWRSLPKMAGLLRCGKSCRLRWTNYLRLDIKRGPFTVEEEKLVIQLHGILGNRWAAIASQLSGRTDNEIKNLWNTHLKKRLIGMGLDPQTHEPFSSHCAATVKAPTSPSTRHMAQWESARLEAEARLSRESSLFNNPTFSKSAAADADDFFLRMWNSEVGEAFRRVKCADTSVTCQSPISQSSTSTKCGSRSVSAITTEVVTNLTAPPATDSNQKEVVEGKNHKLYVEDVMVGSDSSSSNDLENSSDNALQLLLDFPINNDMSFFESNFDKYTTTSALLLDNSFISSF* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00686 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Pte1g00686 324 Gene3D - 70 117 - -
Pte1g00686 324 FunFam Myb transcription factor 11 68 - -
Pte1g00686 324 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Pte1g00686 324 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Pte1g00686 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Pte1g00686 324 CDD SANT 16 62 IPR001005 -
Pte1g00686 324 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Pte1g00686 324 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Pte1g00686 324 Gene3D - 11 68 - -
Pte1g00686 324 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pte1g00686 324 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 265 - -
Pte1g00686 324 CDD SANT 70 113 IPR001005 -
Pte1g00686 324 SMART sant 67 115 IPR001005 -
Pte1g00686 324 SMART sant 13 64 IPR001005 -
Pte1g00686 324 FunFam MYB transcription factor 69 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00686 Pte-Chr1 9264572 9266665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00686 1 325 MYB Transcription Factor Family AT3G61250 61.094 1.45e-130 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte1g00686 Myb_DNA-binding 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00686 K09422 - qsa:O6P43_017601 478.404