Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00679 ATGGATCGGGGGGACTCAATGACATCATCTGGTTCTGGTTCTTACTATATACAGAGGCCGCAGTCTGATCTTCAAGCTCCTCCTGTAATCCGGCAATTGTCGAATCCAAACTTGCAGTTCCCACCAAATATTGGAGGTGGCTCAACACTACCACTGGAATCCTCTGTTGGAATTTCCCCTCGTGGTGTCACGGTGGGTGCACCATCTCCACCAGCGGCTCCACATGCAGAAGTTGTTAAAAGAAAAAGAGGAAGGCCTAGGAAGTATGGGCCTCCTGATGGGGCTGTATCATTGGCATTATCGCCCTCGTATTCTTCTCATCCTGAGACAGTATCACCCAACCAGATTCATCAGAAGCGGGGTAGAGGGCGCCCTCCTGGATCTGGAAAAAGACAGCAGTTGGCTACTCAGGGTGCATCGATGTCTGGTTCAGCTGGGATGGGTTTTGCTACACATGTCATCAACATTGCAATTGGAGAAGACGTTGCAACAAAAATAATGGCTTTTGCACAGCAGGGCCAAAGAGCTATCTGTATTTTGTCGGCTAATGGTGCTGTCTCCTCTGTGACACTTCATCAAGCTTCTACTTCAGGCGGCAGTGTCACACATGAGGGGCGTTTTGAGATAGTATGTCTGTCAGGCTCGTTCGTGCTTGCCGATGCTGGAAACTCCCATAGTCGGACTGGCGGTATCAGTGTCTCCCTCGCCAGTCCAGATGGTCAAGTAATTGGTGGAGGACTTTGTGGACTGCTTATTGCAGCAAGTCCTGTTCAGGTGATCATTGGAAGTTTCATATGGGGAGGAACAAGGACAAAACGCAAGAAAACAGAGGCTAATGAAGGAGCAACAGACGCAGATCATCAGCCAGTTCATAATCCAGTTGCTTCAAGTGATAATCTTACCCCAAACCTCTTCCATGGGGGGTTGACCTGCTTCAAGACCTATATGGATAGTTCGCATAATTCACATGTTGACATTGATTGA 984 0.4848 MDRGDSMTSSGSGSYYIQRPQSDLQAPPVIRQLSNPNLQFPPNIGGGSTLPLESSVGISPRGVTVGAPSPPAAPHAEVVKRKRGRPRKYGPPDGAVSLALSPSYSSHPETVSPNQIHQKRGRGRPPGSGKRQQLATQGASMSGSAGMGFATHVINIAIGEDVATKIMAFAQQGQRAICILSANGAVSSVTLHQASTSGGSVTHEGRFEIVCLSGSFVLADAGNSHSRTGGISVSLASPDGQVIGGGLCGLLIAASPVQVIIGSFIWGGTRTKRKKTEANEGATDADHQPVHNPVASSDNLTPNLFHGGLTCFKTYMDSSHNSHVDID* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00679 327 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 63 296 IPR039605 GO:0003680
Pte1g00679 327 ProSiteProfiles PPC domain profile profile. 145 286 IPR005175 -
Pte1g00679 327 MobiDBLite consensus disorder prediction 275 297 - -
Pte1g00679 327 Gene3D - 150 285 - -
Pte1g00679 327 CDD DUF296 151 264 IPR005175 -
Pte1g00679 327 MobiDBLite consensus disorder prediction 1 55 - -
Pte1g00679 327 MobiDBLite consensus disorder prediction 99 117 - -
Pte1g00679 327 SUPERFAMILY AF0104/ALDC/Ptd012-like 149 270 - -
Pte1g00679 327 Pfam Plants and Prokaryotes Conserved (PCC) domain 151 264 IPR005175 -
Pte1g00679 327 MobiDBLite consensus disorder prediction 1 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00679 Pte-Chr1 9166134 9170577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00679 79 327 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 50.775 4.14e-66 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00679 - - qsa:O6P43_017611 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00679 1 9166134 9170577 Pte1g00679 1 9166134 9170577 RCT