Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00658 ATGCACATGGCTGCCTCTAGCCTTTCTTCACTGAAAATTTTCAGTAATTCTCTCAAGCTTTCTGCGAATTTTGGTTGTCTAGCCAAATATGCTGATCACAGAAATGCAAGATCGTCCAGTGTTCTATTGAAATATGATTATCGGAACAGCGGGGTTCAAAATTTTGAAAAAATTTCTGGTCATAGACGAGTTGGCGAATTAGGTTGTCAATCTTTTGGTGTTAAGAGTAATTGCGAACACAAACCCATGGGTTTCTTTTCTCGGAAGTTCTCGCTTTTGGGTTTGTCAAGTGCTGCTGCTACTGCTTCAGCTAGAAATTTATGGGATTGTAGGGCGTACTCGACGTTTTTTGGTGACAAAGGTCGTAGGGGTGATGGTGCAGGAGTGCCTGCTGTTTCTGATACAGGTGATATGAATGTTAGTGATGATGCTGGTGTTGCTAGTGCGGCCAGTGATTGGATTGATAAGGTGAAAGATGCTTTGAAGAGTGCAGCAGATGGAGCTGCATTTACCATGCAAAAGGCGAAAGACGCTTCTGATGAGCTAACCCCACATGTTCAAAAAGTGCTTGATTCACATCCTTACTTGAAAGATGTGGTTATCCCTGCTGGAACTACATTTGCTGCTACTATACTAGCTTGGTTAGTTATGCCTAGGATTTTACGGAAATTTCATAAATATTCGTTGCAAAGTCCAGTTTCTATGCTACCCGGAAGCATATCTGAGGAGCAAGTTCCATATGAAAAGAGTTTCTGGGGTGCATTGGAGGATCCAGTTCGATACTTAGTCACCTTTATGGCATTTTCGCAAATCGGCGTCATGGTAGCTCCAACAACGATTGCCTCACAGTATCTTGTACAGACATGGAGGGGAGCGGTGATCCTTTCATTTGTGTGGCTTTTGCAAAGATGGAAAACGAATGTGTTCACCCGTGTATTGTCCAGTAGAACTCTGATTGCGGTCGATAGGGAAAAATTGCTTGCTCTGGACAAAATTTCATCTGTTGGTCTATTTGTCATAGGCATAATGGCTTTAGCTGAGGCATGTGGCGTGGCTGTGCAATCTATTCTAACTGTAGGTGGCATAGGAGGAGTTGCAACTGCTTTTGCTGCCAGGGACATCCTTGGAAATGTGCTCAGTGGACTGAGTATGCAGTTCTCGAAGCCTTTTTCCATTGGAGATACAATAAAAGCTGGTGCTATTGAAGGTCAAGTGGTCGAAATGGGACTTACTGCCACATCTCTGTTAAATGCTGAAAAGTTTCCAGTCATAGTACCAAATTCCTTGTTTTCTAGTCAGGTGATTGTGAATAAGTCACGTGCTCAGTGTCGTGCCATTACATCCAAAATACCACTTCACCTTGATGATTTAAGTAAGATTCCTCAAATATCAGATGATATTAAGAGCATGTTAAGATCATACTCGAAGGTTTTCTTGGGGAAGGACGCTCCCTACTGTTTCTTGTCACGAGTAGAAAGTTCACATGCAGAGTTGACACTTGGATACAACCTAAAACACATGAGCAAAGATGAATTATACTCTGCCGAACAGGATGTTCTTTTGCAGTCGGTGGATATAATTAAAAAGCATGGGGGAACATTGGGCAGTTCATGGCAAGAGGAGACTAATAGGTGA 1635 0.4251 MHMAASSLSSLKIFSNSLKLSANFGCLAKYADHRNARSSSVLLKYDYRNSGVQNFEKISGHRRVGELGCQSFGVKSNCEHKPMGFFSRKFSLLGLSSAAATASARNLWDCRAYSTFFGDKGRRGDGAGVPAVSDTGDMNVSDDAGVASAASDWIDKVKDALKSAADGAAFTMQKAKDASDELTPHVQKVLDSHPYLKDVVIPAGTTFAATILAWLVMPRILRKFHKYSLQSPVSMLPGSISEEQVPYEKSFWGALEDPVRYLVTFMAFSQIGVMVAPTTIASQYLVQTWRGAVILSFVWLLQRWKTNVFTRVLSSRTLIAVDREKLLALDKISSVGLFVIGIMALAEACGVAVQSILTVGGIGGVATAFAARDILGNVLSGLSMQFSKPFSIGDTIKAGAIEGQVVEMGLTATSLLNAEKFPVIVPNSLFSSQVIVNKSRAQCRAITSKIPLHLDDLSKIPQISDDIKSMLRSYSKVFLGKDAPYCFLSRVESSHAELTLGYNLKHMSKDELYSAEQDVLLQSVDIIKKHGGTLGSSWQEETNR* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00658 544 Gene3D - 284 388 - -
Pte1g00658 544 Pfam Mechanosensitive ion channel 331 531 IPR006685 GO:0016020|GO:0055085
Pte1g00658 544 Gene3D - 389 437 IPR023408 -
Pte1g00658 544 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 153 537 - -
Pte1g00658 544 SUPERFAMILY Sm-like ribonucleoproteins 373 438 IPR010920 -
Pte1g00658 544 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 285 372 IPR011014 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00658 Pte-Chr1 8403131 8407273 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00658 153 542 Mechanosensitive Ion Channel Family AT4G00290 69.744 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00658 K22047 - qsa:O6P43_017660 656.751