Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte1g00653 | ATGGTGTCTGCGAATCCCAATCCAGCTCAGGGCTTTCACTTCTTCGATTCCATGAGAATGGGTCTTCCAGGTATGAATACGTATCTACCTTCCACGGCGCCGGCTGCTACTGCTGTTACTGCTTTGAATTGCAACTCTGTGCCGTCAACGGAAGGGACTAATAGTTTGACAGCTATGCCGGAGGATCTGAGTAAGAAAGTCCGCAAGCCGTATACGATTACCAAGTCTAGAGAGAGCTGGACGGAGCAGGAGCATGACAAGTTTATAGAAGCACTTCAATTATTTGATCGGGACTGGAAGAAGATCGAAGCATTTGTGGGATCTAAGTCCGTGATCCAGATTCGTAGCCATGCACAAAAATATTTTATGAAGGTGCAGAAGAGTGGAACAAGTGAACATGTACCACCTCCTCGACCAAAGAGAAAAGCTGCTCATCCATACCCACAAAAAGCCCCAAAAGGTCCTACGTTATCACAAGCTACCATTCCAGCAGCATTTGTTGAGCCAGCATATATTTATTGGCCAGATTCATCTTCTGCTCTGGCTAGTCCTGCGACGAATATGCTTATGCCCTCTGGGTGTTATAACGCCATGCCAACAGTCAATATGCCACAACCAACAAAAGATGGCATGGTATCAGGAACACAACCTGTAGCGAACAATTGTTGCTGCAGTAGCAGTGATGAGAGTACTCAAACAAATCGATCAACTTGGCGAAGGTCAGAGCATGGGATCCATGCCAATAAAATGAAAGTGACACCTGATTTTGCTCAAGTTTACAGTTTTATTGGAAGTGTATTTGATCCTGAAGCCACTGGTCAGCTGCAAAAACTGAAGAAGATGGACCCTATAAATGTGGAAACAATATTGTTGTTGGTGAGGAATCTCTGTGTTAATTTACGGAGTCCTGAATTTGAAGATCATAGGAAACTACTTTCTTCATATGATACAGACTTTGAAAAGGCAAATGCTGGACGTCCTTTCAGCATTTCCCACAACGATAAATCTGATTTGTCTATGGTTCTATCTGCTTGA | 1035 | 0.4377 | MVSANPNPAQGFHFFDSMRMGLPGMNTYLPSTAPAATAVTALNCNSVPSTEGTNSLTAMPEDLSKKVRKPYTITKSRESWTEQEHDKFIEALQLFDRDWKKIEAFVGSKSVIQIRSHAQKYFMKVQKSGTSEHVPPPRPKRKAAHPYPQKAPKGPTLSQATIPAAFVEPAYIYWPDSSSALASPATNMLMPSGCYNAMPTVNMPQPTKDGMVSGTQPVANNCCCSSSDESTQTNRSTWRRSEHGIHANKMKVTPDFAQVYSFIGSVFDPEATGQLQKLKKMDPINVETILLLVRNLCVNLRSPEFEDHRKLLSSYDTDFEKANAGRPFSISHNDKSDLSMVLSA* | 345 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte1g00653 | 344 | MobiDBLite | consensus disorder prediction | 126 | 156 | - | - | |
Pte1g00653 | 344 | CDD | SANT | 79 | 122 | IPR001005 | - | |
Pte1g00653 | 344 | Pfam | Myb-like DNA-binding domain | 77 | 122 | IPR001005 | - | |
Pte1g00653 | 344 | PANTHER | SWI/SNF COMPLEX-RELATED | 48 | 301 | - | - | |
Pte1g00653 | 344 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 72 | 126 | IPR017930 | - | |
Pte1g00653 | 344 | SUPERFAMILY | Homeodomain-like | 71 | 127 | IPR009057 | - | |
Pte1g00653 | 344 | Gene3D | - | 80 | 127 | - | - | |
Pte1g00653 | 344 | ProSiteProfiles | SANT domain profile. | 75 | 126 | IPR017884 | - | |
Pte1g00653 | 344 | FunFam | protein REVEILLE 6 isoform X1 | 79 | 127 | - | - | |
Pte1g00653 | 344 | ProSiteProfiles | Myb-like domain profile. | 72 | 122 | IPR001005 | - | |
Pte1g00653 | 344 | SMART | sant | 76 | 124 | IPR001005 | - | |
Pte1g00653 | 344 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 75 | 124 | IPR006447 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte1g00653 | Pte-Chr1 | 8330535 | 8335487 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Pte1g00653 | Myb_DNA-binding | 5.4e-11 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte1g00653 | - | - | rcu:107262692 | 402.519 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pte1g00653 | 1 | 8330535 | 8335487 | Pte1g00653 | 1 | 8330535 | 8335487 | RCT |