Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00648 ATGGAAGATGATTGGGATCTTAACGCTGTTGTCAGAGGCTGTACTACTCTTGCTTCTGCATCATCTTCTACCTCCACCATAGCCACCAGAACCACCACAGCAGCCTCCCCTTATTCTGCATCGTCAAATTGTTATGGGACAAACTATCAGCTTGTTGCTACATCTGGATTCCCTACTGCTTTTGATGGTGGACAGGAAAATCAATTGTTTTCTCTACCAGATCCCTTTGAATCAAGGAATAGCGCTGAAGGACTGCATGAGATGTGCAAGCCTTTCTTTCCCAAATTACAGGCTTTCACCCCTAAAGATGAGACCTTGACTTGTTTCTCTTACACCACTGCACCCAAAGTAGCTCAAGTACAACAAAAGCAAAAACAGTTGCTTCATACACAGTCTGGTACCACTCCAAGATCCAAACGAAGAAAGAACCAACATAAGAAAGTCTGTCAAGTAGCAGCTGAGGCTCTATCTGAAGATATATGGTCATGGAGGAAATATGGACAAAAACCCATCAAGGGATCTCCATATCCAAGAAGTTACTACAGATGCAGCAGCTCAAAAGGGTGCTTAGCCCGTAAACAAGTGGAGAGGAACAGATCTGACCCAAGAATGTTCATTGTCACATACACTGCTGAGCACAACCACCCTGTTCCAACACACAAAAACTCACTTGCTGGTTCCACACGCCAAAAGCCCGCGACACCCAAAGCAGCTGGTGATGGTGACTCTGATCAAAAGCTGCCGACTAAACCCGCCTCCCCGGTGACACCAAAAATAGAGGAGGAAGGTGCAACTCAGAGTACAATTTCACAGAACAGAGAAGAAGACAAGGAAGAGTTTGCAGATGATGAGGAAGAAGAAGACGAATTGGTTTTACGTGATATGGAGCTGACAGATGATTTCTTCACGGGTTTTGATGAATTCACGAGCCCAGCTTCTTTTCCGGACCACTTTCCAGCTACCATTGCTATTTCTTCTTGGATAACTAATGGTACTGCAGCTGCCGCAAGCACCAGTTGA 1020 0.4529 MEDDWDLNAVVRGCTTLASASSSTSTIATRTTTAASPYSASSNCYGTNYQLVATSGFPTAFDGGQENQLFSLPDPFESRNSAEGLHEMCKPFFPKLQAFTPKDETLTCFSYTTAPKVAQVQQKQKQLLHTQSGTTPRSKRRKNQHKKVCQVAAEALSEDIWSWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERNRSDPRMFIVTYTAEHNHPVPTHKNSLAGSTRQKPATPKAAGDGDSDQKLPTKPASPVTPKIEEEGATQSTISQNREEDKEEFADDEEEEDELVLRDMELTDDFFTGFDEFTSPASFPDHFPATIAISSWITNGTAAAASTS* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00648 339 FunFam WRKY transcription factor 22 141 211 - -
Pte1g00648 339 MobiDBLite consensus disorder prediction 211 288 - -
Pte1g00648 339 ProSiteProfiles WRKY domain profile. 152 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g00648 339 Gene3D WRKY domain 141 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte1g00648 339 SUPERFAMILY WRKY DNA-binding domain 154 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte1g00648 339 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 311 IPR044810 GO:0003700
Pte1g00648 339 MobiDBLite consensus disorder prediction 215 230 - -
Pte1g00648 339 SMART WRKY_cls 157 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g00648 339 MobiDBLite consensus disorder prediction 122 146 - -
Pte1g00648 339 Pfam WRKY DNA -binding domain 158 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00648 Pte-Chr1 8199002 8200889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00648 1 333 WRKY Transcription Factor Family AT4G01250 44.606 1.02e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte1g00648 WRKY 2.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00648 K13425 - qsa:O6P43_017681 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00648 1 8199002 8200889 Pte9g00392 9 4546779 4547791 RCT
Pte1g00648 1 8199002 8200889 Pte1g00648 1 8199002 8200889 RCT