Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00635 ATGCCGAAGAATAAGGGAAAGGGAGGTAAGAACAGGAAGAGGGGAAAGAATGAGGCTGATGATGAAAAGAGAGAACTTGTTTTCAAGGAAGATGGACAGGAGTATGCCCAAGTGCTACGAATGCTTGGTAATGGTAGATGTGAAGCAATGTGCATCGATGGAACGAAACGACTTTGCCATATTCGAGGAAAGATGCACAAGAAGGTGTGGATTGCTGCTGGAGATATCATTCTAGTTGGACTGAGAGACTACCAGGATGACAAGGCTGATGTAATTCTCAAGTATATGGGAGATGAAGCAAGGCTGCTCAAGGCTTATGGTGAGCTTCCTGATAGTACTCGGCTCAACGAGATTGGTGCAGGTATGGATGATGAGGATGAAGGTGGTGACGATAATTATGTGGAGTTTGAAGACGAAGATATTGATAGGATCTAA 435 0.4414 MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMGDEARLLKAYGELPDSTRLNEIGAGMDDEDEGGDDNYVEFEDEDIDRI* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00635 144 ProSiteProfiles S1 domain IF1 type profile. 22 96 IPR006196 GO:0003723|GO:0003743|GO:0006413
Pte1g00635 144 Pfam Translation initiation factor 1A / IF-1 32 93 IPR006196 GO:0003723|GO:0003743|GO:0006413
Pte1g00635 144 Hamap Translation initiation factor 1A [eif1a]. 16 110 IPR001253 GO:0003743|GO:0006413
Pte1g00635 144 FunFam Eukaryotic translation initiation factor 1A 2 144 - -
Pte1g00635 144 MobiDBLite consensus disorder prediction 122 144 - -
Pte1g00635 144 MobiDBLite consensus disorder prediction 119 144 - -
Pte1g00635 144 PANTHER EIF-1A 1 144 IPR001253 GO:0003743|GO:0006413
Pte1g00635 144 SUPERFAMILY Nucleic acid-binding proteins 2 143 IPR012340 -
Pte1g00635 144 CDD S1_IF1A 33 109 IPR001253 GO:0003743|GO:0006413
Pte1g00635 144 NCBIfam translation initiation factor eIF-1A 14 110 IPR001253 GO:0003743|GO:0006413
Pte1g00635 144 SMART eIF1neu4 28 110 IPR001253 GO:0003743|GO:0006413
Pte1g00635 144 ProSitePatterns Eukaryotic initiation factor 1A signature. 41 63 IPR018104 GO:0003743|GO:0006413
Pte1g00635 144 Gene3D - 2 144 IPR012340 -
Pte1g00635 144 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00635 Pte-Chr1 8082244 8083811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00635 1 145 Eukaryotic Initiation Factors Gene Family AT2G04520 89.041 1.70e-86 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00635 K03236 - pda:103719006 259.996