Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00625 ATGCATGTTTTCCAATGGATTCACTCATGTCATTACTTGCTCTCTGATTCAAACCTCTGTCACAAATCAACTTTCGTGTTGTTGGTGAAATTCAAACTATGGACAAACGCCATAGAAAGCAACAGAAGAGAAGCAACTGCAATTCTGAGGGTGAGTTTTCCGAGCTTCATGTCCAGCTTGAATCAAGTCATCAAAGTACACGAACTGTCTTCCATTGCATGCATTTTCTTTCTCATCAGTATTGCTTTCTGCAAGAGTTGGCTGGTTTTCTTTATGCTTGTGTTCGGAATCCATGTAATGACAGAGGTAAGCAGTGCTGAATGGAGCTTCATAAACATGTCAGAGCAAGAAGAAGATCTCATCCATAGAATGTACAGGCTTGTGGGAGACAGATGGGGACTGATAGCTGGTCGGATACCAGGTAGAAAGGCCGAAGAGATAGAGAGATTTTGGATAATGAGACATGGAGACATGTTTGCTGGTAAAAGAGAAGAGCTTAATGGACGTAAACCTAATTAA 519 0.4123 MHVFQWIHSCHYLLSDSNLCHKSTFVLLVKFKLWTNAIESNRREATAILRVSFPSFMSSLNQVIKVHELSSIACIFFLISIAFCKSWLVFFMLVFGIHVMTEVSSAEWSFINMSEQEEDLIHRMYRLVGDRWGLIAGRIPGRKAEEIERFWIMRHGDMFAGKREELNGRKPN* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00625 172 CDD SANT 112 151 IPR001005 -
Pte1g00625 172 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 112 153 - -
Pte1g00625 172 SUPERFAMILY Homeodomain-like 114 152 IPR009057 -
Pte1g00625 172 FunFam MYB-like transcription factor 112 154 - -
Pte1g00625 172 Gene3D - 114 154 - -
Pte1g00625 172 SMART sant 109 157 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00625 Pte-Chr1 7926174 7927009 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00625 112 151 MYB Transcription Factor Family AT5G14750 52.500 3.81e-11 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00625 K09422 - tcc:18614004 120.168