Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00618 ATGGGATATGCATCAGCTCAGCCGGTAGATTTGAACCTTGAAGCTTACACAAAAGCAAGATTTGACGAGAATGGAGATGCAACTCTGGGGTCATATCCTTCGTGGCTGAAAAAGCATCCTTCTGCCTTGGAGAGGTTTGAACAAATGATGAGAACAGTTGAAGGGAAAGAGATTGTAGTGTTTCTAGACTACGATGGAACCCTCTCACCAATTGTGGATGACCCTGAAAAAGCATTCATGACTGATGCGATGCGTTCAGCTGTTCATGAAGTGGCTGATCATTTTCCTACGGCAATTGTCAGCGGAAGGCGCAGGGACAAAGTATATGAATTTGTGCAATTGGAAAATGTTTTCTATGCTGGCAGTCATGGCATGGATATATCAACCCCATCTGGCTCCATAAACTTTGGAGATCAAACCAACCAGACTATAACTATTGATGACAAGGGCAATGAAGTGTTTTCTTTTCAACCAGCTCAAGATTTTTTGCCAAAAATTCAAGAGCTGATTAAGGTTCTGGAAGAGAACATAAAAAACATAAAGGGTTCCATGGTAGAAGACAACAAGTTCTGCATATCTGTACACTATCGACGTGTTAAAAATGCAGAGGATGTAGCAATTCTTAAGAAAATGGTGGAGTCCATTATGAAAGCTCACCCAGAATTTCACATATCCAGAGGCAAAAAGGTTATGGAGATAAGGCCGACAATAAATTGGGATAAAGGTCGAGCTTTGCAGTATTTACTTGACACTCTCGGATTTGATAGCTTGAGTAATGCAGTTCCTCTCTATATAGGTGATGACAGAACTGACGAAGATGCTTTCAAGGTCATAAGGAACACTGGACAAGGGTTTCCAATTGTTGTTTCTTCCACTGCAAAGGACACAAAGGCTTCATACTCACTAAGAGATCCAGCTGATGTAATGACATTTTTGACAAGTTTGGCAAAATGGAAGAAAAGAAGCTCATGA 972 0.4084 MGYASAQPVDLNLEAYTKARFDENGDATLGSYPSWLKKHPSALERFEQMMRTVEGKEIVVFLDYDGTLSPIVDDPEKAFMTDAMRSAVHEVADHFPTAIVSGRRRDKVYEFVQLENVFYAGSHGMDISTPSGSINFGDQTNQTITIDDKGNEVFSFQPAQDFLPKIQELIKVLEENIKNIKGSMVEDNKFCISVHYRRVKNAEDVAILKKMVESIMKAHPEFHISRGKKVMEIRPTINWDKGRALQYLLDTLGFDSLSNAVPLYIGDDRTDEDAFKVIRNTGQGFPIVVSSTAKDTKASYSLRDPADVMTFLTSLAKWKKRSS* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00618 323 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 28 323 IPR044651 GO:0004805|GO:0005992
Pte1g00618 323 SUPERFAMILY HAD-like 59 319 IPR036412 -
Pte1g00618 323 FunFam Trehalose 6-phosphate phosphatase 165 323 - -
Pte1g00618 323 NCBIfam HAD-IIB family hydrolase 60 279 IPR006379 -
Pte1g00618 323 Gene3D - 156 323 IPR023214 -
Pte1g00618 323 Gene3D - 58 151 IPR023214 -
Pte1g00618 323 NCBIfam trehalose-phosphatase 56 316 IPR003337 GO:0003824|GO:0005992
Pte1g00618 323 CDD HAD_TPP 59 309 - -
Pte1g00618 323 Pfam Trehalose-phosphatase 61 305 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00618 Pte-Chr1 7857217 7859548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00618 60 316 Trehalose Biosynthesis Gene Families AT1G23870 25.092 7.89e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00618 K01087 - qsa:O6P43_017762 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00618 1 7857217 7859548 Pte1g00618 1 7857217 7859548 RCT