Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00606 ATGAAGGTTGACGTTGGCTTAGGAGGTGGACTATGGAATGATGAAGATAAGGCAATGGTGGCTGCGGTTATGGGACCTCAAGCTCTTGATTATTTGATATCTAACTCAGTTTCTAATGAGAATTTGTTAATGGCCGTGGGGAGTGATGAGAATTTGCAGAACAAGCTTTCGGATCTAGTGGAACGTCCTAACTTGTCAAATTTCAGCTGGAACTATGCGATTTTCTGGCAAATTTCAAGGTCAAAGTCCGGCGATTTGGTTTTGGGATGGGGAGATGGTTCTTGCAGGGAACCAAGGGAGGGGCCAGAGTCTCGAGCTGGTGGCTTTTTCAACCTTCGTTTTCATGATGAGACTCAGCAGAAGATGAGAAAAAGGGTACTACAAAAGCTGCATACATTATTTGGAGGTTCAGAAGAAGACAATTATGCCTATGGATTAGACCGTGTGACTGATACAGAGATGTTTTTTCTGGCTTCTATGTACTTCTCATTCCGTCGAGGGGAAGGTGGTCCAGGAAAGTGCCTTTCATCTGGTAAGCATATCTGGCTATGTGATGTGCTGAAATCTAATTCAGATTACTGTGTAAGGTCATTTTTGGCTAGAACAGCTGGCATGCAGACTATTGTTTTAGTCCCAACCGATATGGGAGTAGTGGAATTGGGCTCTGTGAGGCCAGTAGGCGAAAGCTATGAGTTGTTGCAGACACTAAAAACTGCGTTCTCAACAAATTCAGTCGCAGCCAAAGCTAAGCCACCCTCTCAGTTGCCGGTTAATGAGAGACAAGATGAAAGCTTTATTTTCTCAAATTTGGCAATTGCAGAAAAAGTTGAAGGAGCTGCAAAGATTTTTGGCCAGGATTTGAACACAGTGAACTCCGGTCGATCTCAGTTTAGAGAGAAACTAGCTGTTAGAAAAATGGAGGAGAAGGCATGGGAAGGCTACGCTAATGGAAGTCGGATTTCCTTTCCAAGCTCTCAAAATGGCGGTGGCGTTCATGGTTCAAGTTGGTTACCTATCCATGGTGTGAAGCAGGTTAGTCCTGTCGAAATATATGGTTCTCATGGTTCAGCTAATAATATACAGAAGCTAGGAAATGGTGTTAGAGAAGATTTTCGACTTAGTAATTATCAACCCCAAAAGTCTGTACAATTGGAGATTGATTTCTCCGGTGCCACTTCAAGACCTTCTCTGATTGCTAGGCCTGTTGCAGCTGAATCGGAGCATTCAGATGTCGAAGCTTCATGCAGGGAAGAACAGGCCTGTACAACTGATGATAGGAGGCCTCGCAAACGAGGAAGAAAGCCTGCAAACGGCAGGGAAGAGCCCCTAAATCATGTGGAAGCTGAGAGGCAACGGAGAGAAAAACTTAACCAGAGGTTCTATGCACTAAGAGCTGTTGTCCCAAAGATCTCAAAGATGGACAAGGCCTCCTTATTGGGAGATGCCATTTCTTATATTAATGAGCTCCAGGCAAAACTGAGGATTATGGAAGCCGAGAAGGAGAGGTCTGGAGGCACATCTAGAGATTCATTGACTTTAGCATCTACGGAAAGAGTAGAGAATCAGAATCAAGTGCTGGATGTAGATGTCGAAGCATCCCAAGATCAGGTGATCGTGCGAGTAAACTGCCCATTGAATTCACATCCTGTTGCCAGAGTCATCCAAGCATTCAAAGAGGCACAGATCACAGTTTTGGACTCTAAACTTACTACAGCCAATGATTCTATATTACATACTTTTGTGATTAAATCTCAAGGTTCAGAAAAGTTGACCAAGGAAAAACTGATTGCAGCATTTCCCCCAGAATCATCCTCGTCCTTACAGCCATCATCGTCAACTTGTTAG 1845 0.439 MKVDVGLGGGLWNDEDKAMVAAVMGPQALDYLISNSVSNENLLMAVGSDENLQNKLSDLVERPNLSNFSWNYAIFWQISRSKSGDLVLGWGDGSCREPREGPESRAGGFFNLRFHDETQQKMRKRVLQKLHTLFGGSEEDNYAYGLDRVTDTEMFFLASMYFSFRRGEGGPGKCLSSGKHIWLCDVLKSNSDYCVRSFLARTAGMQTIVLVPTDMGVVELGSVRPVGESYELLQTLKTAFSTNSVAAKAKPPSQLPVNERQDESFIFSNLAIAEKVEGAAKIFGQDLNTVNSGRSQFREKLAVRKMEEKAWEGYANGSRISFPSSQNGGGVHGSSWLPIHGVKQVSPVEIYGSHGSANNIQKLGNGVREDFRLSNYQPQKSVQLEIDFSGATSRPSLIARPVAAESEHSDVEASCREEQACTTDDRRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPKISKMDKASLLGDAISYINELQAKLRIMEAEKERSGGTSRDSLTLASTERVENQNQVLDVDVEASQDQVIVRVNCPLNSHPVARVIQAFKEAQITVLDSKLTTANDSILHTFVIKSQGSEKLTKEKLIAAFPPESSSSLQPSSSTC* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00606 614 SMART finulus 446 495 IPR011598 GO:0046983
Pte1g00606 614 MobiDBLite consensus disorder prediction 405 451 - -
Pte1g00606 614 Gene3D - 433 503 IPR036638 GO:0046983
Pte1g00606 614 MobiDBLite consensus disorder prediction 402 451 - -
Pte1g00606 614 FunFam Transcription factor bHLH13 433 506 - -
Pte1g00606 614 PANTHER MYC 29 598 IPR045084 GO:0003700|GO:0006355
Pte1g00606 614 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 443 503 IPR036638 GO:0046983
Pte1g00606 614 CDD bHLH_AtAIB_like 437 514 - -
Pte1g00606 614 Pfam Helix-loop-helix DNA-binding domain 444 490 IPR011598 GO:0046983
Pte1g00606 614 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 52 240 IPR025610 -
Pte1g00606 614 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 440 489 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00606 Pte-Chr1 7708470 7710314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00606 5 613 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 50.698 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte1g00606 bHLH-MYC_N 2.1e-52 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00606 - - qsa:O6P43_017798 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00606 1 7708470 7710314 Pte1g00606 1 7708470 7710314 RCT