Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00605 ATGGGGCAGCCACGGTACACTCATGAAGATGACCTCACCACCACCGCCTCCACCGCCGAAAACTCCATGGAAACCACCACTCTAATCACCATCGTTTCCCAGTCGAAGCCCGAGAATGCCCCACTAAGTGGTACACGCCATCCGGTATACCGTGGTGTGCGAAAGCGGAGATGGGGCAAATGGGTGTCCGAGATTAGAGAACCTCGAAAGAAATCACGTATATGGCTAGGTTCTTTCCCGATACCTGAGATGGCTGCCAAGGCATATGATGTTGCAGCCTACTGCTTGAAAGGAAGAAAAGCTCTACTGAATTTTCCAGATGAAGTAGAAAGCTTGCCGAGGCCTCCTTCTTCTGCAGCTAGAGATATTCAAGCAGCTGCAGCAAAGGCAGCGCAGACGATGAAGAGTACTGCTGCAAGTACAATTCCAAGTGTAGGTGCATGCACAAGCTCAAGTGCTATGTCTTCTTCCTCCAATGTCAGCAGCAAGAGTGACATTAGTCTCAACATGGGTGATCAAGGTGATGGTAATGGTAATGGCGAAGAAGATGACTTCTGGGGTGAGATTGAATTGCCTGAGCTGAAGATAAACAAAGGATGTCAATGGAATTCATGTGGGTCATTGGCGTTTTTCGGCGACGTCACCACATTGCTGCAAGACGGTGAGGCTCATCAGCAACAGTACATGGCGTGTCTGTAA 699 0.4936 MGQPRYTHEDDLTTTASTAENSMETTTLITIVSQSKPENAPLSGTRHPVYRGVRKRRWGKWVSEIREPRKKSRIWLGSFPIPEMAAKAYDVAAYCLKGRKALLNFPDEVESLPRPPSSAARDIQAAAAKAAQTMKSTAASTIPSVGACTSSSAMSSSSNVSSKSDISLNMGDQGDGNGNGEEDDFWGEIELPELKINKGCQWNSCGSLAFFGDVTTLLQDGEAHQQQYMACL* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00605 232 Pfam AP2 domain 48 98 IPR001471 GO:0003700|GO:0006355
Pte1g00605 232 SUPERFAMILY DNA-binding domain 49 108 IPR016177 GO:0003677
Pte1g00605 232 ProSiteProfiles AP2/ERF domain profile. 49 106 IPR001471 GO:0003700|GO:0006355
Pte1g00605 232 FunFam Ethylene-responsive transcription factor 2 48 107 - -
Pte1g00605 232 PRINTS Ethylene responsive element binding protein signature 88 108 IPR001471 GO:0003700|GO:0006355
Pte1g00605 232 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Pte1g00605 232 MobiDBLite consensus disorder prediction 1 24 - -
Pte1g00605 232 Gene3D AP2/ERF domain 49 107 IPR036955 GO:0003700|GO:0006355
Pte1g00605 232 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 31 194 - -
Pte1g00605 232 SMART rav1_2 49 112 IPR001471 GO:0003700|GO:0006355
Pte1g00605 232 MobiDBLite consensus disorder prediction 149 184 - -
Pte1g00605 232 MobiDBLite consensus disorder prediction 149 174 - -
Pte1g00605 232 CDD AP2 50 107 IPR001471 GO:0003700|GO:0006355
Pte1g00605 232 MobiDBLite consensus disorder prediction 8 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00605 Pte-Chr1 7682283 7683059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00605 43 233 AP2-EREBP Transcription Factor Family AT1G01250 56.021 9.32e-58 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte1g00605 AP2 2.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00605 K09286 - qsa:O6P43_017799 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00605 1 7682283 7683059 Pte1g00605 1 7682283 7683059 RCT