Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00595 ATGAATTCTGGGCGTGTGCCGGTTTCGCCGGAAATTGGCAGTCATAATAGTAATGCTATGTCCAGGACAGCGGAGCCTCCCAAGGGCGAGGACGACTGTGTAGAAAAAGATCCAACTGCTCGATATTTACGGTACAATGAAATCTTGGGCAAGGGTGCTTTCAAGACTGTCTATAGGGCATTTGATGAAATTGATGGAATCGAAGTTGCTTGGAACCAGGTTAGGATTGATGATATCCTGCGATCACCAGACGATCTGGAAAAGCTGTACACTGAAGTCCATCTTTTGAAATCCTTGAAACATGACAACATTATCAAGCTCTACCATTCCTGGGTTGATGAGAAGAAGAAAAATATCAACATGATTACTGAGCTCTTCACTTCAGGAAACCTAAGACAATATCGCAAGAAGCACAAAAAGGTGGATATGAAAGCCATTAAGAATTGGGCTCGTCAGGTTCTTCATGGTTTGGTCTATCTTCATGGTCACAAGCCACCTGTGATTCACAGAGATCTTAAATGTGACAATATTTTTGTGAATGGGAATCATGGAGAAGTGAAAATAGGAGACCTTGGTTTGGCAACTATCATGCAGCAACCAACTGCTCGAAGTGTTATTGGAACTCCTGAGTTTATGGCTCCAGAACTTTATGAAGAAGAATACACTGAACTCGTAGACATTTATTCCTTTGGGATGTGCATTTTGGAGATGGTCACTTTTGAGTACCCTTATAGTGAATGCCACAACCCAGCTCAAATCTACAAGAAAGTAACCACTGGTATTAAACCAGCTTCCCTTTCCAAGGTCACTGACCCACAAGTAAAGGAGTTTGTCGAGAAATGCTTGGTTCCAGCATCTGAGAGATTGTCTGCAATCGAACTTCTCAAAGATCCATTTCTACAAATTCAGAACCCCAAGGAACCTAATCGAGATCCCTTTTTACAGTTACCTAGCATATGTCCGAAAGCTACAAACCAACCGCAGTCTGGTCCTCTATCCATGGAAATAGATTCTGATTACAAACACATTTCTTCTAATCCTTGTGCTGGTAGCGATACTGGAAGTCCTCGAGGCCTGGTTTTAGAATTTAAAAGGACTAATCTGAACAATGAATTCAGGTTGAGAGGGAAGAAGAACGATGACAACTCAGTGTCATTAACCTTACGAATTGCTGATTCATGTGGTCAAGTTAAAAATATACATTTCATGTTTTATCTTGATGTGGATACTGCAATCTCTGTGGCGGGAGAGATGGTTGAACAACTGGAGTTGGCCGATCAGGATGTTGGCTTCATAGCTGAGATCATTGACTACTTGATAATGAAACTTCTGCCTTGGTGGAAGCCCTCTTCTGACTGCTCTTCAATCGAAGCTGTAAGTCTTGATGGAGATTCTCTGGATTACCTACAGGGTAAAAACTCAATGGCTTGCCCTTGGGATTCTGTTGTTGATCAAACCCATTACTTACAATCAAAACCTATTATGCAAGAAGGTCATTTTACAGCTGAAGAAAGTTCCTTCCATAATAATACTGATAGCGCTATATCTCAGGGTGAGTATAACTCTTCTCCTAGTTTGGCTAACTTTGACGATAGACATTCACAAGGTTCATTGACATCATTGACGCTTGTTGATGATGCTCCAATGAAAAAAGGAACCTCTGTTGACTTTGACTTTAATGGGAGCTGTAAAAACCTTAGTGGGTCTATTTCTGAACTGGAGTTGGGAGAGACATTGCTGGAGGAATGGAGACTCAGAACTGACAGCAATGCTGGAGGGTGCATGACAACGATGAACAGATTTGTGAAGAATGCCGAGTCACCGATGCAGGTGTTGATCGGAATGTCTAATGTTGTGAGTCAGACAAGCAGTTGTTCTTTTCATTCTTTTCTGTCAGATAAAGACCCTGATCTTGAGTTAAAGATGCAACTTGAAACAATTGAGGCACAGTATGAGCACTGGTTTCAAGAACTCAACAGAATGAAGGCGGAGGCATTGGATGCTGCCAGAAGGAAATGGCTAACCGAGAAAAAACTGGCAGGCCATTGA 2049 0.4187 MNSGRVPVSPEIGSHNSNAMSRTAEPPKGEDDCVEKDPTARYLRYNEILGKGAFKTVYRAFDEIDGIEVAWNQVRIDDILRSPDDLEKLYTEVHLLKSLKHDNIIKLYHSWVDEKKKNINMITELFTSGNLRQYRKKHKKVDMKAIKNWARQVLHGLVYLHGHKPPVIHRDLKCDNIFVNGNHGEVKIGDLGLATIMQQPTARSVIGTPEFMAPELYEEEYTELVDIYSFGMCILEMVTFEYPYSECHNPAQIYKKVTTGIKPASLSKVTDPQVKEFVEKCLVPASERLSAIELLKDPFLQIQNPKEPNRDPFLQLPSICPKATNQPQSGPLSMEIDSDYKHISSNPCAGSDTGSPRGLVLEFKRTNLNNEFRLRGKKNDDNSVSLTLRIADSCGQVKNIHFMFYLDVDTAISVAGEMVEQLELADQDVGFIAEIIDYLIMKLLPWWKPSSDCSSIEAVSLDGDSLDYLQGKNSMACPWDSVVDQTHYLQSKPIMQEGHFTAEESSFHNNTDSAISQGEYNSSPSLANFDDRHSQGSLTSLTLVDDAPMKKGTSVDFDFNGSCKNLSGSISELELGETLLEEWRLRTDSNAGGCMTTMNRFVKNAESPMQVLIGMSNVVSQTSSCSFHSFLSDKDPDLELKMQLETIEAQYEHWFQELNRMKAEALDAARRKWLTEKKLAGH* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00595 682 Coils Coil 644 664 - -
Pte1g00595 682 MobiDBLite consensus disorder prediction 1 23 - -
Pte1g00595 682 FunFam Probable serine/threonine-protein kinase WNK1 28 124 - -
Pte1g00595 682 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 27 662 - -
Pte1g00595 682 Pfam Protein kinase domain 46 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00595 682 Gene3D Phosphorylase Kinase; domain 1 28 124 - -
Pte1g00595 682 Gene3D Transferase(Phosphotransferase) domain 1 126 305 - -
Pte1g00595 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Pte1g00595 682 SMART serkin_6 43 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00595 682 FunFam probable serine/threonine-protein kinase WNK9 126 305 - -
Pte1g00595 682 ProSiteProfiles Protein kinase domain profile. 43 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00595 682 SUPERFAMILY Protein kinase-like (PK-like) 45 301 IPR011009 -
Pte1g00595 682 CDD STKc_WNK 41 300 - -
Pte1g00595 682 Gene3D - 382 451 - -
Pte1g00595 682 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00595 Pte-Chr1 7517562 7521828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00595 620 680 MAP Kinase Kinase Kinase AT5G41990 39.394 5.67e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pte1g00595 Pkinase 1.8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00595 K08867 - qsa:O6P43_027404 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00595 1 7517562 7521828 Pte1g00595 1 7517562 7521828 RCT