Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00591 ATGGTAGGAAAATTGATGCCAGATGCTGCCCTTGACCCCGCAAGTCTGGTTGTGGTTGCTGTGGGAAATGCCTATGCATTGTCATCGGCCGTGTACATTGCAGCGGACATTTCTGGGGGGCATGTGAATCCGGCTGTTACGTTTGCACGCACAATTGGAGGCCACATCAATGTTCCCACTGCTCTCTTCTATTGGATCTCGCAGTTGGTGGGTTCTTTGCTGGCTTGCCTCGTCTTGAAAGTCACAGTCGTTGGAATGAATATTAGTTTGTTGATTCGAAAATATTTGAATGTAGACCCTACTCATCATCCTCCTCCATGTGCACAGCACGTACCAACGTATGGAATTGCAGAAGAGATGACTGGGTTTGGAGCATCCGTATTGGAAGGTGTGTTGACATTTGGACTGGTGTACACTGTGTATGCTGCCAAGGACCCTAGGCGCAGTGCACAGGGAGCATGCTTGGGAATTTTGGCAATAGGGCTAATGGGAGGAGCCAGTGTCTTTGCTCTAGGGCCCTTTTCTGGTGGGGTAACCAATCCAGCATGCGCCTTCGCCACTGCAATCACTGCCGGCAGTTTCAGGAATCAAGCTGTGTATTGGGTTGGACCCTTGATAGGTGCTGCTATCGCTGGCCTCGTTTATGACAACGTAATTTTCCCAGCTCAACCTGACGATTCTACCACAGGAGTTGCAGGCCTTCATATCTAA 711 0.4979 MVGKLMPDAALDPASLVVVAVGNAYALSSAVYIAADISGGHVNPAVTFARTIGGHINVPTALFYWISQLVGSLLACLVLKVTVVGMNISLLIRKYLNVDPTHHPPPCAQHVPTYGIAEEMTGFGASVLEGVLTFGLVYTVYAAKDPRRSAQGACLGILAIGLMGGASVFALGPFSGGVTNPACAFATAITAGSFRNQAVYWVGPLIGAAIAGLVYDNVIFPAQPDDSTTGVAGLHI* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00591 236 ProSitePatterns MIP family signature. 41 49 IPR022357 -
Pte1g00591 236 PRINTS Major intrinsic protein family signature 23 47 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte1g00591 236 PRINTS Major intrinsic protein family signature 128 146 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte1g00591 236 PRINTS Major intrinsic protein family signature 161 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte1g00591 236 PRINTS Major intrinsic protein family signature 60 79 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte1g00591 236 PRINTS Major intrinsic protein family signature 198 218 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte1g00591 236 Gene3D Glycerol uptake facilitator protein. 1 229 IPR023271 -
Pte1g00591 236 SUPERFAMILY Aquaporin-like 10 224 IPR023271 -
Pte1g00591 236 PANTHER AQUAPORIN-8 8 220 IPR034294 -
Pte1g00591 236 Pfam Major intrinsic protein 14 215 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00591 Pte-Chr1 7499063 7500014 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00591 4 230 Major Intrinsic Protein MIP AT3G47440 55.702 6.31e-78 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00591 K09873 - zju:107414222 292.737