Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00590 ATGATTCTTTACAAACTGGTTGTCCTCTCAATTTTGGGGCTTGCCATTCTATGGTTAATTAGAATTTTTCTGTTTAAAACTGGGTTGATTTACATGGTCAAAAAACAATGGACGGCAATCCAAGATTGTTTCCATGTTTATCAATCCTTCAAAGTCCCAGAATTTAATCAAAACACGCAAGAAAATCAGCTCTACAGAAAAGTTTCTTTGTACCTACACTCGCTTCCTTCTATTGAAGACTCGGACTTCACGAACCTCGTTGCTGGCAAGAAAGCAAATGATATCGTTTTGTCCCTGGACCCAAACCAGACAGTGGAAGATAACTTTCTCGGTGCTAGAGTGTATTGGCTCAACCATCAGCAGCAGCAACAGGACTCAGACCACAACAGTCAGAGCCGAAGAACATTGGTACTCAGAATTAGAAAAGCTGACAAACGTCGTATCCTCCGACCATACCTCCAACACATCCACACAGTTGCTGATGAAATCGAACAAGGTAATCGAGATTTGAAGCTTTACATGAACATCAACAATGGTCAATGGAAATCGGTGGCTTTCACTCATCCATCAACGTTTGAAACCATGGCTATGGAGACGGACCTCAAGAACAAAATCAAATCCGACCTCGAATCGTTTCTCAAAGCGAAGCAATACTATAACAGACTAGGCCGTGTTTGGAAACGAAGCTTCTTGTTGTACGGTCCATCTGGGACTGGGAAAACGAGTTTCATAGCTGCCATGTCGAATTTCTTATCCTACGATGTATACGACATCGATCTCTCCAAGGTTGTCGACGATTCAGAGCTGAAGCTGTTGATTTTACAGACGACATCGAAATCGATCATGGTGATCGAAGATCTCGATCGGTTTTTGATGGAGAAACCAACGGGTGTGAGTTCATCAGTTATACTGAACTTCATGGATGGCTTACTGAATTCTTGTTGTGTTGAGGAGAGGATCATGGTATTCACGATGAATAACAAGGACAATGTTGACCCGGCAATGTTGAGACCGGGCCGGGTCGATGTCCATATCCATTTTCCTTTATGTGATTTCACGGCGTTCAAGAGTTTGGCGATTAGTTATTTGGGTGTGAGAGAGCACAAGCTTTTCCCACAGGTTGAAGAAATGTTTCAAATCGGGGCAAGTTTGAGTCCGGCAGAGATTGGCGAGTTGATATTAGCAAACCGGAACTCGCCGAATCGGGCCATTAAGTCAGTTATCAGTGCTTTACAAACGGACGGTGATGGAAGGGGAAGTGGGAGAATCTTACGGAGATTATCTGACCACATGGCACTGAGTGAGCCGGGTGCGGGTGGCGGGTCGGGGAGTGAAGGATTACATACTGTAAAGGATTTCAAGAAACTTTACGGTTTCTTGAGAATGAGAAGTGGCAAATGGAAATCTCCATCGTTGGATGGGAGGTCGAGTCCAAGGCAAGGGTGA 1446 0.4419 MILYKLVVLSILGLAILWLIRIFLFKTGLIYMVKKQWTAIQDCFHVYQSFKVPEFNQNTQENQLYRKVSLYLHSLPSIEDSDFTNLVAGKKANDIVLSLDPNQTVEDNFLGARVYWLNHQQQQQDSDHNSQSRRTLVLRIRKADKRRILRPYLQHIHTVADEIEQGNRDLKLYMNINNGQWKSVAFTHPSTFETMAMETDLKNKIKSDLESFLKAKQYYNRLGRVWKRSFLLYGPSGTGKTSFIAAMSNFLSYDVYDIDLSKVVDDSELKLLILQTTSKSIMVIEDLDRFLMEKPTGVSSSVILNFMDGLLNSCCVEERIMVFTMNNKDNVDPAMLRPGRVDVHIHFPLCDFTAFKSLAISYLGVREHKLFPQVEEMFQIGASLSPAEIGELILANRNSPNRAIKSVISALQTDGDGRGSGRILRRLSDHMALSEPGAGGGSGSEGLHTVKDFKKLYGFLRMRSGKWKSPSLDGRSSPRQG* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00590 481 PANTHER BCS1 AAA-TYPE ATPASE 37 412 - -
Pte1g00590 481 SMART AAA_5 226 351 IPR003593 GO:0016887
Pte1g00590 481 Pfam ATPase family associated with various cellular activities (AAA) 231 349 IPR003959 GO:0005524|GO:0016887
Pte1g00590 481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 409 IPR027417 -
Pte1g00590 481 Gene3D - 180 349 IPR027417 -
Pte1g00590 481 Pfam Domain associated at C-terminal with AAA 29 119 IPR025753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00590 Pte-Chr1 7491917 7494051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00590 222 385 Calmodulin-binding Proteins AT3G56690 28.649 1.86e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00590 - - qsa:O6P43_018558 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00590 1 7491917 7494051 Pte1g00590 1 7491917 7494051 RCT