Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00588 ATGGCTTCTGATGGTAAAGTTTTTACATTTGAGGAAGTGGCTAAGCACAATCACAAGAAAGATTGTTGGATTATCGTCAATGGAAAGGTGTATGATGTCACACCATTTTTGGATGATCACCCAGGAGGTGATGAAGTTTTGCTGTTAGCTGCTGAAAAGGATGCGACAAATGATTTTGAAGAAGTTGGTCACAGCTTATCTGCAAGGGAGACCATGGAAAAATTTTATGTAGGTGAAATTGACGCCTCCACCATTCCACCAGAACCTGATTACCGTATTCCACCTCCTCCTAGGGCACCTACTGTTAGCGAGCCATCTGGATTTGGAATGAAAATATTGCAATATTTGATCCCTTTGTTGCTTCTGGGCCTTGCATTTTCTCTTCAATACTTGAAGAAGCCTACTTCAGCCAATCAAGAAAACTGA 426 0.4131 MASDGKVFTFEEVAKHNHKKDCWIIVNGKVYDVTPFLDDHPGGDEVLLLAAEKDATNDFEEVGHSLSARETMEKFYVGEIDASTIPPEPDYRIPPPPRAPTVSEPSGFGMKILQYLIPLLLLGLAFSLQYLKKPTSANQEN* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00588 141 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Pte1g00588 141 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Pte1g00588 141 PANTHER CYTOCHROME B5 3 131 - -
Pte1g00588 141 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 90 IPR036400 -
Pte1g00588 141 FunFam Cytochrome b5 type B 2 85 - -
Pte1g00588 141 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Pte1g00588 141 Gene3D - 1 87 IPR036400 -
Pte1g00588 141 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Pte1g00588 141 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Pte1g00588 141 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Pte1g00588 141 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Pte1g00588 141 MobiDBLite consensus disorder prediction 82 103 - -
Pte1g00588 141 SMART Cyt_b5_2 8 81 IPR001199 -
Pte1g00588 141 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00588 Pte-Chr1 7480986 7482605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00588 1 133 NADPH P450 reductases AT5G53560 57.143 2.01e-54 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00588 K23490 - qsa:O6P43_018551 186.037