Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00586 ATGGGAAGTGGAGACAAAAGTTTAAAGGGTTTCAATCTGCACCTGCCTAATCATCATCATCACTATGAGAAGAAGCAAGTTTTCAGGGATGTACCAAAAGGGTGTTTGGCAATCAAAGTGGGACACGGAGAACAGCAGCAGAGGTTTGTGGTGCCTGTGTTGTACTTCAATCACCCACTGTTCATGCAGCTGTTGAAAGAGGCTGAAGAAGAGTATGGGTTTGATCAAAAAGATTTCAGATGA 243 0.4321 MGSGDKSLKGFNLHLPNHHHHYEKKQVFRDVPKGCLAIKVGHGEQQQRFVVPVLYFNHPLFMQLLKEAEEEYGFDQKDFR* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00586 80 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 23 77 IPR003676 GO:0009733
Pte1g00586 80 Pfam Auxin responsive protein 25 77 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00586 Pte-Chr1 7460656 7462250 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00586 30 76 Calmodulin-binding Proteins AT5G20810 55.319 4.28e-11 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00586 K14488 - pop:7497282 137.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00586 1 7460656 7462250 Pte1g00586 1 7460656 7462250 RCT