Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00585 ATGGGTCAGTGTTACGGTAAAACCAATCCCACTGATGATAATGGCAGAGTACAAACCATCGTTGATCGATCGCAGTCACCGTTGCCCTTACCGGACACTAGCATAGCCACTGATGCAAGTACTTCAGTAAAGATCACGCCGGCGAGGTCTTCGAACCCGAGCCCATGGCCTAGTCCTTACCCACATGGAGTAAACGCAAGTCCAATGCCAGCGGGAGTGTCTCCGTCTCCGGCGAGAACATCGACGCCGAGGAGATTCTTCCGGCGGCCGTTTCCGCCACCATCTCCGGCGAAGCACATACGGGCTTCATTGGCGAAAAGGTTGGGATATGGGAAGCCGAAGGAAGAACCGATCCCGGAGGACCGTGGGACGGAGCCGGAGCAGGCTTTGGACAAGAGCTTTGGTTACAACAAGAATTTTGGAGCGAAGTATGAATTGGGGAAGGAGGTGGGTCGAGGGCATTTTGGTCATACGTGTTCTGGAAGGGGTAAGAAGGGGGATACCAAAGATCAGCCAATTGCTGTTAAGATTATTTCTAAGTCTAAGATGACAACGGCAATTGCAATTGAAGATGTTCGCAGAGAGGTGAAGATATTAAAAGCTCTCTCTGGCCATAGGCATCTGGTTAAGTTTTATGATGCTTGTGAGGATGCGAATAATGTGTACATAATAATGGAGTTGTGTGAAGGAGGGGAGCTTCTAGACCAAATCTTGTCTAGAGGGGGAAGATATGCTGAGGAAGATGCAAAGGTTATAGTATTGCAAATTTTAAGTGTGGTTGCCTTTTGTCATCTTCAAGGAGTTGTTCATCGTGACCTAAAACCAGAGAATTTCCTTTTTACTTCAAGAAGTGACGATGCTGATATGAAACTTATTGATTTTGGCTTATCTGACTTTATTAGACCAGATGAAAGACTTAATGATATTGTCGGTAGTGCATATTACGTTGCACCCGAAGTTCTTCACAGGTCCTATAGTGTGGAAGGAGATATATGGAGTGTTGGTGTTATCACATATATCTTGCTATGTGGAAGCCGACCTTTCTGGGCGCGGACAGAATCTGGAATTTTTCGTTCAGTGCTGAGAGCTGATCCTAACTTTGATGATGTACCCTGGCCATCTGTGTCTCTGGAGGCTAAAGACTTTGTGAAAAGGCTCCTAAATAAGGACTACAGAAAACGTATGACGGCAGCGCAGGCTCTTACTCATCCATGGTTGTGGAAGGATGATTATCCTATCCCTCTGGATATATTGATATATAAGCTAGTCAAATCCTACCTATACGCAACACCGTTCAGACGTGCAGCATTAAAGGCACTTTCAAAAGCTTTGACTGACAATGAGTTGCTGTATCTCAGAGCTCAATTCAGATTGCTAGAACCAAATACAGACGGATACATCTCCCTGGAAAATTTCAAAATGGCTCTAGTCCGCAACACCACTGATGCAATGAGAGAGTCGAGGGTTCTTGATATTATACATGCGGTGAGGCTTTCGTCTTGCTTGTTCTCTTTCACTATCTGCCATGGATGA 1533 0.456 MGQCYGKTNPTDDNGRVQTIVDRSQSPLPLPDTSIATDASTSVKITPARSSNPSPWPSPYPHGVNASPMPAGVSPSPARTSTPRRFFRRPFPPPSPAKHIRASLAKRLGYGKPKEEPIPEDRGTEPEQALDKSFGYNKNFGAKYELGKEVGRGHFGHTCSGRGKKGDTKDQPIAVKIISKSKMTTAIAIEDVRREVKILKALSGHRHLVKFYDACEDANNVYIIMELCEGGELLDQILSRGGRYAEEDAKVIVLQILSVVAFCHLQGVVHRDLKPENFLFTSRSDDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSVEGDIWSVGVITYILLCGSRPFWARTESGIFRSVLRADPNFDDVPWPSVSLEAKDFVKRLLNKDYRKRMTAAQALTHPWLWKDDYPIPLDILIYKLVKSYLYATPFRRAALKALSKALTDNELLYLRAQFRLLEPNTDGYISLENFKMALVRNTTDAMRESRVLDIIHAVRLSSCLFSFTICHG* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00585 510 CDD STKc_CAMK 143 405 - -
Pte1g00585 510 SMART serkin_6 144 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00585 510 ProSiteProfiles EF-hand calcium-binding domain profile. 447 482 IPR002048 GO:0005509
Pte1g00585 510 PANTHER SERINE/THREONINE-PROTEIN KINASE 128 494 - -
Pte1g00585 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Pte1g00585 510 FunFam CDPK-related kinase 3 136 308 - -
Pte1g00585 510 Gene3D Transferase(Phosphotransferase) domain 1 234 417 - -
Pte1g00585 510 SUPERFAMILY EF-hand 432 481 IPR011992 -
Pte1g00585 510 Gene3D Phosphorylase Kinase; domain 1 137 233 - -
Pte1g00585 510 MobiDBLite consensus disorder prediction 23 51 - -
Pte1g00585 510 ProSiteProfiles Protein kinase domain profile. 144 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00585 510 SUPERFAMILY Protein kinase-like (PK-like) 137 427 IPR011009 -
Pte1g00585 510 Pfam Protein kinase domain 144 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00585 510 MobiDBLite consensus disorder prediction 23 82 - -
Pte1g00585 510 ProSitePatterns Protein kinases ATP-binding region signature. 150 176 IPR017441 GO:0005524
Pte1g00585 510 FunFam Calcium-dependent protein kinase SK5 316 411 - -
Pte1g00585 510 FunFam CDPK-related kinase 1 137 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00585 Pte-Chr1 7446783 7452209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00585 1 493 EF-hand Containing Proteins AT3G50530 58.769 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte1g00585 Pkinase 1.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00585 K13412 - qsa:O6P43_027422 842.802