Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00579 ATGGGGAAGAAGGGAGGAAGCTCATGGTTAACTGCTGTCAAAAGGGCTTTCAAATCTCCACTCAAAGACAGCGACAAAAGGAGTAGCAGAAGAGAAGACCATGATCAAGAAGACGACGAAGAAAAGGTACATGTACACCAATACACCAACATCCTGTCCTCATTAGATTTCTTGGAAGAATACGGTGGTGAGGAATATATTTCTACATCAATTTCACTTATGGTTTTCTTCACTCGGGTTGTGCAGAAAAGAGAAAGACGAAGATGGATTTTTAGGAAAATAGTAAATCAAGAGTCAGCGACCACACCAAAGTTTAAGCCTGATGTAGCTACAGGAGGCTCTGAAAGAACAAAAGATGCACCAGTGCCAGTAACTACAGCAGCTGCTGACCAAAAACATGCTCTTGCAGTGGCAGTGGCCACTGCAGAAGCAGCAAGGGCCACTGCTCAAGCCGCCATCGAGATAGCCATGTCGACAAGACCTTCTAATCGCGGTAAAGAGTACTACGCTGCCATTGAGATTCAAACTGCTTTCCGAGGATATCTAGCAAGGAGAGCACTGCGCGCTCTTAAAGGGCTGGTAAAGTTGCAAGCTTTGGTGAGAGGTCATAATGTTAGGAAGCAAGCGAAGATGACCCTTCGTTGCATGCAGGCTCTGGTTCGAGTTCAAGCCCGAGTGCTTGATCAACGCATGAGACTATCACATGAAGGCAGTCGAAAATCTGCATTCAGTGACAACAATAGTGTGGTGGAGTCACGTTATCTTCATGACATATCAGATAGAAGATCATTATCAAGAGAGGAAAGCAGCATTGCAGATGACTGGGATGAACGACTCCTTACAGTTGAAGAAGTTAAATCATTGTGGCTGCAGAGGAAAGGAGGTGCAATGAAGCATGATAAATCTTTGTCTCGTGTTTTTCCTCAGCAGATTTGGAGGAATGGTAGGAGCCTCTCAATTGGGAATGAAGAAGAACTGGAAGACAGACCCAAATGGCTTGATAGGTGGATGGCAACGAAGCCATGGGAGGCAAGTAGAAGAGCTTCAACTGACCAAAGAGAATTAATCAGAACTGTTGAAATGGATACATCGCGACCTTATTCATATTTAGCACCTAACTTCAGAAGATCTCATCCAAATTATCAATACCATCCCCATTCTCAACAGCAACACAGGCAAAGCACTCAATCCGTAGCTTCACCACTCCACAGAATCCATCAAAATGTTTCTGTTCACAAATATTCTCCTATAACCCCTTCTGGGGCGAAGTCCAGGCCTATTCAAATTCGGTCTACAGTAAGTCCTCGTTTTACTAGAGAAGATAGAAGCTGCAACACATCTCAAACACCTAGCTTAAGGTCTGATTATCATGACAGTGGTAATCTACATCATAACGAAAGGGTTGGAACAAACAGTAGTGTTAGCAGTAGTGCTATTTTGCCGAATTACATGGCAGCAACTGAGTCTGCTAAAGCTAGAATACGGTCTCAGAGTGCACCAAGGCATAGACCTTCAACACCAGAGAGAGATAGAGTAGGGTCTGCAAAGAAAAGGCTTTCATATCCAGCTCCAGACACTTTTGGTGTAGGAGGTCAGAGGTATGGGAATAATAGCAATACTTTGAGGAGTCCAAGCTTTAAGAGTGTGAGTGGCTCACACTTTGGGTTGGAACAGCAATCAAACTATTCATCTTGCTGCACTGAAAGTATTGGAGGTGGTGAGATTTCCCCTTCTTCTACTGGTGACCTTAGAAGATGGTTGAGGTGA 1767 0.4414 MGKKGGSSWLTAVKRAFKSPLKDSDKRSSRREDHDQEDDEEKVHVHQYTNILSSLDFLEEYGGEEYISTSISLMVFFTRVVQKRERRRWIFRKIVNQESATTPKFKPDVATGGSERTKDAPVPVTTAAADQKHALAVAVATAEAARATAQAAIEIAMSTRPSNRGKEYYAAIEIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRMRLSHEGSRKSAFSDNNSVVESRYLHDISDRRSLSREESSIADDWDERLLTVEEVKSLWLQRKGGAMKHDKSLSRVFPQQIWRNGRSLSIGNEEELEDRPKWLDRWMATKPWEASRRASTDQRELIRTVEMDTSRPYSYLAPNFRRSHPNYQYHPHSQQQHRQSTQSVASPLHRIHQNVSVHKYSPITPSGAKSRPIQIRSTVSPRFTREDRSCNTSQTPSLRSDYHDSGNLHHNERVGTNSSVSSSAILPNYMAATESAKARIRSQSAPRHRPSTPERDRVGSAKKRLSYPAPDTFGVGGQRYGNNSNTLRSPSFKSVSGSHFGLEQQSNYSSCCTESIGGGEISPSSTGDLRRWLR* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00579 588 Gene3D - 166 218 - -
Pte1g00579 588 ProSiteProfiles IQ motif profile. 167 195 IPR000048 GO:0005515
Pte1g00579 588 Pfam IQ calmodulin-binding motif 194 210 IPR000048 GO:0005515
Pte1g00579 588 Pfam IQ calmodulin-binding motif 170 188 IPR000048 GO:0005515
Pte1g00579 588 MobiDBLite consensus disorder prediction 380 404 - -
Pte1g00579 588 FunFam IQ-domain 11 166 217 - -
Pte1g00579 588 PANTHER IQ-DOMAIN 5-RELATED 1 523 - -
Pte1g00579 588 MobiDBLite consensus disorder prediction 411 456 - -
Pte1g00579 588 MobiDBLite consensus disorder prediction 567 588 - -
Pte1g00579 588 MobiDBLite consensus disorder prediction 502 516 - -
Pte1g00579 588 Pfam Protein of unknown function (DUF4005) 434 541 IPR025064 -
Pte1g00579 588 MobiDBLite consensus disorder prediction 531 553 - -
Pte1g00579 588 MobiDBLite consensus disorder prediction 379 475 - -
Pte1g00579 588 ProSiteProfiles IQ motif profile. 191 218 IPR000048 GO:0005515
Pte1g00579 588 MobiDBLite consensus disorder prediction 488 553 - -
Pte1g00579 588 MobiDBLite consensus disorder prediction 19 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00579 Pte-Chr1 7381579 7383954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00579 9 589 IQD Protein Family AT4G00820 50.927 3.09e-159 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00579 - - qsa:O6P43_018534 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00579 1 7381579 7383954 Pte1g00579 1 7381579 7383954 RCT