Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00557 ATGGAAGCACGAAATTCTCAACATACACAGATTATTGAAATTAATGCTGATATTCCTGGTGGGTCAAGCGATATTGGTCGGAGTAAGATATGTGGAGAAGCACCATGCGGTTTTGCTGATGCAGGGTCCATCTCCAAGGATGCAAAAGAACGATCAAGTTCAATGCGCAAGCTCATAATAGCTGTTGTACTTTGTGTTATTTTCATGAGTGTTGAAGTGGTTGGAGGCATAAAAGCCAATAGCCTTGCAATATTAACTGATGCAGCACACCTCCTTTCAGATGTTGCCGCTTTTGCAATCTCTTTGTTCTCATTATGGGCTGCAGGCTGGGAAGCCAATCCCCGTCAGTCCTATGGTTTTTTCAGGATAGAGATTCTAGGTGCCCTGGTTTCCATCCAACTCATTTGGTTACTTGCTGGGATTCTTGTGTATGAAGCCATTCAAAGACTCCTGAATGATATGGGCGAAGTGAATGGCTTTCTAATGTTTGCAGTTTCTGCATTTGGTCTTTTGGTTAATATTGTCATGGCTGTGTTATTAGGGCATGATCATGGCCATGGGCATGATCACGGCCATAAACACAGTCCACATGAGCATGGCCATAGCCATGGAGTGACGATCTCTACTCATCATCATCAACATCATCATGATGTGCAGCAAGAAAGTGGAGAGCATTGTCATGATCATGAAGAGAACAAGCACCATCCTTCCCATCAAGATCAGGATCACCCCTTACTAGACAGTTCAAATGGCAGGGATAAAGAGAAAAAACGGAATATAAATGTGCATGGAGCTTATCTCCATGTTCTTGGGGACTCCATTCAAAGCATTGGGGTAATGATTGGTGGTGCAATCATTTGGTATAAGCCAGAGTGGATGATAGTTGACTTGATTTGCACCCTAATATTTTCGATCATTGTTCTTGGAACTACAATCAACATGCTCCGGAGCATACTTGAAGTTTTGATGGAAAGCACACCAAGAGAGATTGATGCCACAAAGCTTGAAAAGGATCTCCTGGAAATGGATGAAGTGGTTGCTGTTCATGAGTTGCATATATGGGCAATCACAGTGGGAAAGGTACTTTTGGCCTGTCATGTTAAAGTCATTCCTGAAGCAGATGCAGACAGGGTGCTGGACAATGTAATAGACTACATTAGAAGGGTCTATAATATCAGTCATGTAACTGTCCAGATAGAGCGTTAA 1206 0.4262 MEARNSQHTQIIEINADIPGGSSDIGRSKICGEAPCGFADAGSISKDAKERSSSMRKLIIAVVLCVIFMSVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEANPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIQRLLNDMGEVNGFLMFAVSAFGLLVNIVMAVLLGHDHGHGHDHGHKHSPHEHGHSHGVTISTHHHQHHHDVQQESGEHCHDHEENKHHPSHQDQDHPLLDSSNGRDKEKKRNINVHGAYLHVLGDSIQSIGVMIGGAIIWYKPEWMIVDLICTLIFSIIVLGTTINMLRSILEVLMESTPREIDATKLEKDLLEMDEVVAVHELHIWAITVGKVLLACHVKVIPEADADRVLDNVIDYIRRVYNISHVTVQIER* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00557 401 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 329 400 IPR036837 -
Pte1g00557 401 NCBIfam cation diffusion facilitator family transporter 55 401 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pte1g00557 401 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 5 401 - -
Pte1g00557 401 Gene3D Cation efflux protein transmembrane domain 54 322 IPR027469 -
Pte1g00557 401 MobiDBLite consensus disorder prediction 200 254 - -
Pte1g00557 401 Pfam Cation efflux family 58 323 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pte1g00557 401 SUPERFAMILY Cation efflux protein transmembrane domain-like 52 324 IPR027469 -
Pte1g00557 401 MobiDBLite consensus disorder prediction 185 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00557 Pte-Chr1 7134946 7138348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00557 1 402 Inorganic Solute Cotransporters AT2G46800 73.086 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00557 K14689 - zju:107423776 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00557 1 7134946 7138348 Pte1g00557 1 7134946 7138348 RCT