Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00555 ATGGACCTATTGTCTTTCAATCAAAGCAACCACTTGCAGGCATCAACTGAAGGATGCAATTCTCGAAGGAGCAGGGCCCATGGAATGCATCTCTATGAATATGTTGGCAACTATCCTAGGTTCAATCAGGTTTTAAATTCAGAATTGTCCAATCATACTGCTTTGGTCATTAAGAAAATATTTAACAGCTATGATGGATTTGCTAATCTGAAGAGTCTAGTTGATATTGGTGGTAGAACTAGAGTAGCTCTTGGTTTTATCAAGTCCACGTATCCAAAAATTGAAGCTATTAACTTTGACTTGCCTCTAGTTATAAAGCATGTCCCACCTTATCCTGGAGTGAAGCATGTTGCTGGGGACATGTTTGAAAGTGTTCCAAAGGGTGATGCTATACTTTTGATGTGGGTACTTCGAGATTGGAGTGATGAATGCTGCGTGAGGCTGTTGCAGAACTGCTACAAGGCACTTCCAAGAAATGGGAAAGTATTGGTGATTGACAGGATGCTGCCATTGTTGGCTGAGGTTCACCCTTTTTCAACGGATGTCTTTCAATCAGATCTGCTCTTGATGGCTCAAACTGTTGGGGGAAGAGAGCGAAAGCAGAATGAATTCGATAGACTTGTGTTTGAAGCTGGATTCAAAAGCTGGTCCATGCCCAAATGTAATGCCCTTAACTGTCTTTTTATTGAGCTGAATAAGTAG 702 0.4131 MDLLSFNQSNHLQASTEGCNSRRSRAHGMHLYEYVGNYPRFNQVLNSELSNHTALVIKKIFNSYDGFANLKSLVDIGGRTRVALGFIKSTYPKIEAINFDLPLVIKHVPPYPGVKHVAGDMFESVPKGDAILLMWVLRDWSDECCVRLLQNCYKALPRNGKVLVIDRMLPLLAEVHPFSTDVFQSDLLLMAQTVGGRERKQNEFDRLVFEAGFKSWSMPKCNALNCLFIELNK* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00555 233 PANTHER O-METHYLTRANSFERASE 22 213 IPR016461 GO:0008168
Pte1g00555 233 Gene3D Vaccinia Virus protein VP39 42 217 IPR029063 -
Pte1g00555 233 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 233 IPR016461 GO:0008168
Pte1g00555 233 Pfam O-methyltransferase domain 23 214 IPR001077 GO:0008171
Pte1g00555 233 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 20 224 IPR029063 -
Pte1g00555 233 Gene3D - 22 60 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00555 Pte-Chr1 7104177 7110124 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00555 24 233 Monolignol Biosynthesis Gene Families AT5G54160 45.714 2.47e-66 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00555 K13066 - cave:132186918 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00555 1 7104177 7110124 Pte1g00555 1 7104177 7110124 RCT