Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte1g00553 | ATGGATGCGGATTCCTCTAGAAACGAAGCGGTAATCAAGACAAGAAAGCCATACACCATTATGAAGCAGCGAGAAAGATGGACAGAGGAGGAGCACAGTAGGTTTCTAGAAGCCTTGAGGTTGTATGGACGAACATGGCAGCGCATAGAAGAGCATATAGGGACAAAGACGGCTGTGCAGATCAGAAGCCATGCACAAAAATTCTTTTCAAAGTTGGAGAAAGAGTCTGTTGTAAAAGGGGTCCCAATAGGAGAATCTGTCGACATAGAAATTCCACCTCCACGGCCTAAAAGAAAACCAAGCAATCCTTATCCTCGAAAAACCAATACTGGCTTACCAACATCACAAATCAGAGCAAAGGATGGAAAAACTGGATCAGCTTCAAGTTTATCAAGTAAATCCGCGCCTGGCTTGTTGAAAAATCCATTCCCTGAGATAACTTATGGAGAGGAACACTCAACGACATTGGAACAAAATAAGGATGAAAATCGCACCAAAGTGTTTCCCATTCTTCCGGAGTCTACTTTTTCCTCTGTCTCTTCATCAAATAAAGTTCTCTCACAGATGGCAGAGTCCCTGAGAAATTCGTCTTCGTTGAGGGAGTTCATACCTTCTGTCAAAGAGGTTGTAAATGCGAATGAAACAAATGGATCTGTTGCCACAATTGGACATAAACAGTTGGGGAAAGATGATGTTAAGCAAGCAGAAAATTGTAATAGCACCGGTAAAGCCTCTAGATTAGCAAGTCTGGATGCTTCACAGGTGAAGTTGGCCCCTCATGAGAAAACAGATGATTTGAACTGTCTATTGATAACTGATGACATACAATGCAGTCAGAATTATCCGAGACATGTCCCTTTGCAAGTCCTAGATGGAAGCGTAGGAGCATTCACTCAATTTTGTTCACACGTTCATTCAATGGGAGGTGTTGATGGGGAACCTAGTCTATTTGCAGATTCTACTGTATCAAATGCAAGTGAAATCCATAATAATGGAGCAAGATTTACTGCTAACCAATCTTTTCCTTCCAATCCTCATCTCGCTCCAGTTCCAAATATTGGAGACGATTACCAATCATTTTTGCATGTCTCCTCCATGTTTTCAAATCTAATTGGGTCTACTCTGCTGCAGAACCCTGCAACACAGTCGGCGGCAAGTTTTGCTGCTACTTTCTGGCCATATGCAAATATGGAGACTCCTGCTAACTCTCCAGCATACTGTCCAGGTGTTACATCAAGACAGATGGGATCTACTCCAAGTATGGAAGCTATTGTAGCAGCAACCGTAGCTGCTGCATCCGCATGGTGGGCAGCCAATGGTCTACTTACTTCATGTGCTCCACTTCACACTGCTTTCATGTGTGCTCCAGCACCTGCAGGAGCAATGGCGTCAATACACACTACTCAAGCAGCAGCAGCCAAGATTAGTGACGACACTTCTGTTGAAAATCCTCCTCTGCAAGAACAACTACTTGACCCAGAACACTCTGAAGCAACACAAGGTCTAAATTCTGCTTCAAAGTCGCCAGCAGTTTCATTATCAGAATCTGAGGAGAATGGAGGTGCAAAGGGGAATGCTGCCTCGGTAGATATTGAACATGAAAAAGGCACTGCCATTGCGGAGCATAATGATTCAAACAAATTGAAGGGCTTAAAGCAGGTAGACCGCTCGTCTTGTGGTTCCAACACACCATCTTGTAGTGAAGTAGAAACAGATGTTCTGCTGAAGGATAAAAAGGAAAAGGATGATCCAGAAACTGCTGAAGCAATTCAGTCAGCTTCTGCTTCCATCAATCGTCATCGTAGAACATCAAGCAATGGTACTGACTCTTGGAAGGAGGTCTCTGAAGAGGGGCGGCTAGCTTTCCAAGCTCTCTTCACAAGAGAGTTGTTGCCACAGTGTTTTTCTCCTCCTGATGATCTGGAAAATAAAGGGCAAAAGGAAACCATTCAAGAAAATCATCAAACTATAAATCACACAGTATCGACCCTTGACATTAACAGCAAGAAACGCAGTCCTGATCAGCAAGAAGTGGCAAAAAGCTTGTCCCTTTCTGAAAATGGTGAGGACGAGGGAGAACTGACGATAGGGATTGGACAAGGAAAGCTTAAGCTTCGTCGCACAGTGTTCAAACCTTACAAAAGATGTTCAGTGGAGGTCGAGGGAAACAGAGCTGGACATCCAAGTAACCAAAGTGAAAAAAAAATCCCCAAGGGAATGTGCTTGGAAGGGGGGCTTCAACTTGACATTCATGTCCCATGCGACCAAAGATGA | 2274 | 0.438 | MDADSSRNEAVIKTRKPYTIMKQRERWTEEEHSRFLEALRLYGRTWQRIEEHIGTKTAVQIRSHAQKFFSKLEKESVVKGVPIGESVDIEIPPPRPKRKPSNPYPRKTNTGLPTSQIRAKDGKTGSASSLSSKSAPGLLKNPFPEITYGEEHSTTLEQNKDENRTKVFPILPESTFSSVSSSNKVLSQMAESLRNSSSLREFIPSVKEVVNANETNGSVATIGHKQLGKDDVKQAENCNSTGKASRLASLDASQVKLAPHEKTDDLNCLLITDDIQCSQNYPRHVPLQVLDGSVGAFTQFCSHVHSMGGVDGEPSLFADSTVSNASEIHNNGARFTANQSFPSNPHLAPVPNIGDDYQSFLHVSSMFSNLIGSTLLQNPATQSAASFAATFWPYANMETPANSPAYCPGVTSRQMGSTPSMEAIVAATVAAASAWWAANGLLTSCAPLHTAFMCAPAPAGAMASIHTTQAAAAKISDDTSVENPPLQEQLLDPEHSEATQGLNSASKSPAVSLSESEENGGAKGNAASVDIEHEKGTAIAEHNDSNKLKGLKQVDRSSCGSNTPSCSEVETDVLLKDKKEKDDPETAEAIQSASASINRHRRTSSNGTDSWKEVSEEGRLAFQALFTRELLPQCFSPPDDLENKGQKETIQENHQTINHTVSTLDINSKKRSPDQQEVAKSLSLSENGEDEGELTIGIGQGKLKLRRTVFKPYKRCSVEVEGNRAGHPSNQSEKKIPKGMCLEGGLQLDIHVPCDQR* | 758 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte1g00553 | 757 | Gene3D | - | 26 | 73 | - | - | |
Pte1g00553 | 757 | ProSiteProfiles | SANT domain profile. | 22 | 73 | IPR017884 | - | |
Pte1g00553 | 757 | MobiDBLite | consensus disorder prediction | 589 | 611 | - | - | |
Pte1g00553 | 757 | MobiDBLite | consensus disorder prediction | 86 | 145 | - | - | |
Pte1g00553 | 757 | MobiDBLite | consensus disorder prediction | 494 | 526 | - | - | |
Pte1g00553 | 757 | MobiDBLite | consensus disorder prediction | 555 | 569 | - | - | |
Pte1g00553 | 757 | MobiDBLite | consensus disorder prediction | 538 | 613 | - | - | |
Pte1g00553 | 757 | ProSiteProfiles | Myb-like domain profile. | 19 | 69 | IPR001005 | - | |
Pte1g00553 | 757 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 19 | 73 | IPR017930 | - | |
Pte1g00553 | 757 | SUPERFAMILY | Homeodomain-like | 19 | 74 | IPR009057 | - | |
Pte1g00553 | 757 | PANTHER | SWI/SNF COMPLEX-RELATED | 8 | 629 | - | - | |
Pte1g00553 | 757 | MobiDBLite | consensus disorder prediction | 571 | 587 | - | - | |
Pte1g00553 | 757 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 22 | 71 | IPR006447 | GO:0003677 | |
Pte1g00553 | 757 | MobiDBLite | consensus disorder prediction | 650 | 669 | - | - | |
Pte1g00553 | 757 | FunFam | protein REVEILLE 6 isoform X1 | 26 | 74 | - | - | |
Pte1g00553 | 757 | CDD | SANT | 26 | 69 | IPR001005 | - | |
Pte1g00553 | 757 | MobiDBLite | consensus disorder prediction | 494 | 521 | - | - | |
Pte1g00553 | 757 | SMART | sant | 23 | 71 | IPR001005 | - | |
Pte1g00553 | 757 | MobiDBLite | consensus disorder prediction | 636 | 691 | - | - | |
Pte1g00553 | 757 | Pfam | Myb-like DNA-binding domain | 24 | 67 | IPR001005 | - | |
Pte1g00553 | 757 | MobiDBLite | consensus disorder prediction | 103 | 136 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte1g00553 | Pte-Chr1 | 7092913 | 7099710 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Pte1g00553 | Myb_DNA-binding | 7.9e-13 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte1g00553 | K12133 | - | gmx:778086 | 692.189 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pte1g00553 | 1 | 7092913 | 7099710 | Pte1g00553 | 1 | 7092913 | 7099710 | RCT |