Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00553 ATGGATGCGGATTCCTCTAGAAACGAAGCGGTAATCAAGACAAGAAAGCCATACACCATTATGAAGCAGCGAGAAAGATGGACAGAGGAGGAGCACAGTAGGTTTCTAGAAGCCTTGAGGTTGTATGGACGAACATGGCAGCGCATAGAAGAGCATATAGGGACAAAGACGGCTGTGCAGATCAGAAGCCATGCACAAAAATTCTTTTCAAAGTTGGAGAAAGAGTCTGTTGTAAAAGGGGTCCCAATAGGAGAATCTGTCGACATAGAAATTCCACCTCCACGGCCTAAAAGAAAACCAAGCAATCCTTATCCTCGAAAAACCAATACTGGCTTACCAACATCACAAATCAGAGCAAAGGATGGAAAAACTGGATCAGCTTCAAGTTTATCAAGTAAATCCGCGCCTGGCTTGTTGAAAAATCCATTCCCTGAGATAACTTATGGAGAGGAACACTCAACGACATTGGAACAAAATAAGGATGAAAATCGCACCAAAGTGTTTCCCATTCTTCCGGAGTCTACTTTTTCCTCTGTCTCTTCATCAAATAAAGTTCTCTCACAGATGGCAGAGTCCCTGAGAAATTCGTCTTCGTTGAGGGAGTTCATACCTTCTGTCAAAGAGGTTGTAAATGCGAATGAAACAAATGGATCTGTTGCCACAATTGGACATAAACAGTTGGGGAAAGATGATGTTAAGCAAGCAGAAAATTGTAATAGCACCGGTAAAGCCTCTAGATTAGCAAGTCTGGATGCTTCACAGGTGAAGTTGGCCCCTCATGAGAAAACAGATGATTTGAACTGTCTATTGATAACTGATGACATACAATGCAGTCAGAATTATCCGAGACATGTCCCTTTGCAAGTCCTAGATGGAAGCGTAGGAGCATTCACTCAATTTTGTTCACACGTTCATTCAATGGGAGGTGTTGATGGGGAACCTAGTCTATTTGCAGATTCTACTGTATCAAATGCAAGTGAAATCCATAATAATGGAGCAAGATTTACTGCTAACCAATCTTTTCCTTCCAATCCTCATCTCGCTCCAGTTCCAAATATTGGAGACGATTACCAATCATTTTTGCATGTCTCCTCCATGTTTTCAAATCTAATTGGGTCTACTCTGCTGCAGAACCCTGCAACACAGTCGGCGGCAAGTTTTGCTGCTACTTTCTGGCCATATGCAAATATGGAGACTCCTGCTAACTCTCCAGCATACTGTCCAGGTGTTACATCAAGACAGATGGGATCTACTCCAAGTATGGAAGCTATTGTAGCAGCAACCGTAGCTGCTGCATCCGCATGGTGGGCAGCCAATGGTCTACTTACTTCATGTGCTCCACTTCACACTGCTTTCATGTGTGCTCCAGCACCTGCAGGAGCAATGGCGTCAATACACACTACTCAAGCAGCAGCAGCCAAGATTAGTGACGACACTTCTGTTGAAAATCCTCCTCTGCAAGAACAACTACTTGACCCAGAACACTCTGAAGCAACACAAGGTCTAAATTCTGCTTCAAAGTCGCCAGCAGTTTCATTATCAGAATCTGAGGAGAATGGAGGTGCAAAGGGGAATGCTGCCTCGGTAGATATTGAACATGAAAAAGGCACTGCCATTGCGGAGCATAATGATTCAAACAAATTGAAGGGCTTAAAGCAGGTAGACCGCTCGTCTTGTGGTTCCAACACACCATCTTGTAGTGAAGTAGAAACAGATGTTCTGCTGAAGGATAAAAAGGAAAAGGATGATCCAGAAACTGCTGAAGCAATTCAGTCAGCTTCTGCTTCCATCAATCGTCATCGTAGAACATCAAGCAATGGTACTGACTCTTGGAAGGAGGTCTCTGAAGAGGGGCGGCTAGCTTTCCAAGCTCTCTTCACAAGAGAGTTGTTGCCACAGTGTTTTTCTCCTCCTGATGATCTGGAAAATAAAGGGCAAAAGGAAACCATTCAAGAAAATCATCAAACTATAAATCACACAGTATCGACCCTTGACATTAACAGCAAGAAACGCAGTCCTGATCAGCAAGAAGTGGCAAAAAGCTTGTCCCTTTCTGAAAATGGTGAGGACGAGGGAGAACTGACGATAGGGATTGGACAAGGAAAGCTTAAGCTTCGTCGCACAGTGTTCAAACCTTACAAAAGATGTTCAGTGGAGGTCGAGGGAAACAGAGCTGGACATCCAAGTAACCAAAGTGAAAAAAAAATCCCCAAGGGAATGTGCTTGGAAGGGGGGCTTCAACTTGACATTCATGTCCCATGCGACCAAAGATGA 2274 0.438 MDADSSRNEAVIKTRKPYTIMKQRERWTEEEHSRFLEALRLYGRTWQRIEEHIGTKTAVQIRSHAQKFFSKLEKESVVKGVPIGESVDIEIPPPRPKRKPSNPYPRKTNTGLPTSQIRAKDGKTGSASSLSSKSAPGLLKNPFPEITYGEEHSTTLEQNKDENRTKVFPILPESTFSSVSSSNKVLSQMAESLRNSSSLREFIPSVKEVVNANETNGSVATIGHKQLGKDDVKQAENCNSTGKASRLASLDASQVKLAPHEKTDDLNCLLITDDIQCSQNYPRHVPLQVLDGSVGAFTQFCSHVHSMGGVDGEPSLFADSTVSNASEIHNNGARFTANQSFPSNPHLAPVPNIGDDYQSFLHVSSMFSNLIGSTLLQNPATQSAASFAATFWPYANMETPANSPAYCPGVTSRQMGSTPSMEAIVAATVAAASAWWAANGLLTSCAPLHTAFMCAPAPAGAMASIHTTQAAAAKISDDTSVENPPLQEQLLDPEHSEATQGLNSASKSPAVSLSESEENGGAKGNAASVDIEHEKGTAIAEHNDSNKLKGLKQVDRSSCGSNTPSCSEVETDVLLKDKKEKDDPETAEAIQSASASINRHRRTSSNGTDSWKEVSEEGRLAFQALFTRELLPQCFSPPDDLENKGQKETIQENHQTINHTVSTLDINSKKRSPDQQEVAKSLSLSENGEDEGELTIGIGQGKLKLRRTVFKPYKRCSVEVEGNRAGHPSNQSEKKIPKGMCLEGGLQLDIHVPCDQR* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00553 757 Gene3D - 26 73 - -
Pte1g00553 757 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Pte1g00553 757 MobiDBLite consensus disorder prediction 589 611 - -
Pte1g00553 757 MobiDBLite consensus disorder prediction 86 145 - -
Pte1g00553 757 MobiDBLite consensus disorder prediction 494 526 - -
Pte1g00553 757 MobiDBLite consensus disorder prediction 555 569 - -
Pte1g00553 757 MobiDBLite consensus disorder prediction 538 613 - -
Pte1g00553 757 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Pte1g00553 757 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Pte1g00553 757 SUPERFAMILY Homeodomain-like 19 74 IPR009057 -
Pte1g00553 757 PANTHER SWI/SNF COMPLEX-RELATED 8 629 - -
Pte1g00553 757 MobiDBLite consensus disorder prediction 571 587 - -
Pte1g00553 757 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Pte1g00553 757 MobiDBLite consensus disorder prediction 650 669 - -
Pte1g00553 757 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Pte1g00553 757 CDD SANT 26 69 IPR001005 -
Pte1g00553 757 MobiDBLite consensus disorder prediction 494 521 - -
Pte1g00553 757 SMART sant 23 71 IPR001005 -
Pte1g00553 757 MobiDBLite consensus disorder prediction 636 691 - -
Pte1g00553 757 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Pte1g00553 757 MobiDBLite consensus disorder prediction 103 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00553 Pte-Chr1 7092913 7099710 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte1g00553 Myb_DNA-binding 7.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00553 K12133 - gmx:778086 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00553 1 7092913 7099710 Pte1g00553 1 7092913 7099710 RCT