Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00538 ATGATTACACATCCTTTCTTCTGGGGTTCTAAGTCTGTGTTGTCGGATCCTGTAGAAGGGCATGAAGAACATATATTGAGGAAGATCTGGAAATCTATATATCCCTCAGCTCCAGGCAGTGTTGATAATCTCTTGATCAATCCAGTAATTGATGGAGCAAATACGTTTGCCAGTCTTGGATGTTGTAAGATGTTAGTGACAGTGTCAGAGAATGATGTCCTTAGGAACAGAGGCATTTGGTACTACAATGCTGTCACGAAAACTGGATGGAAAGGAGAAGTCGAGCTCATTGAAATGAAGGGAGAAGGCTACGGTTGCCACATTGATCATGGAGAGATTGAGAGTGCTAGAAATTTCATCAAACACTTAGCATGCGTTTTCCATGACTAA 390 0.4154 MITHPFFWGSKSVLSDPVEGHEEHILRKIWKSIYPSAPGSVDNLLINPVIDGANTFASLGCCKMLVTVSENDVLRNRGIWYYNAVTKTGWKGEVELIEMKGEGYGCHIDHGEIESARNFIKHLACVFHD* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00538 129 Gene3D alpha/beta hydrolase 2 129 IPR029058 -
Pte1g00538 129 Pfam alpha/beta hydrolase fold 26 107 IPR013094 GO:0016787
Pte1g00538 129 SUPERFAMILY alpha/beta-Hydrolases 38 124 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00538 Pte-Chr1 6471920 6472309 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00538 1 124 Carbohydrate Esterase AT3G48700 31.250 3.53e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00538 - K13258 qsa:O6P43_003395 148.673