Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00524 ATGGGGGGTTGTGTCTCAACTAGTAGCCAGAGTACTGGTAGTAGCAGGAGCACTGGAGAGACTGTCTCTCCATCTTGCATGGAAATCACGTTCTGCGGGCAAAAGAAAACAAGGAAAACACTTCCAGATCACGTTGTTTCACTGCAACATTTATCATCCATACCCAATCGGCTTTTTACAAATGGGAAGACCAGAACTTCTTGCATATTTACACAGCAAGGTCGCAAGGGCATCAACCAGGATGCTTTGATTGTGTGGGAAGATTTCATGTCGGAAGATGTTATCTTCTGTGGTGTCTTTGATGGTCATGGTCCACATGGCCACCATGTTGCGCGCAAGGTGCGTGATGTGCTGCCTATTAAGCTGCTTTCATTATTAGACACCAGTCAGTCAAGGCAAGATGGTCCAGGTACAACTTGCTTCAAGGAGAAGCAGAAGAAGCTTGATGGTGGAGAGACCAAGAAGGACTGTTCAGCTGAGGAAAATTTAAATTCTATCTGGAAAGAAGCTTTCCTGAAGTCATACAAGGCTATGGATAAAGAGCTGAGATCTCACCCTAACTTGGACTGCTTCTGTAGTGGTAGCACTGCTGTAACTATAGTGAAGCAGGGATCAAATTTATTTATGGGAAACATTGGTGATTCACGAGCAATCATGGGATCCAAGGACAATAATAACTCAATGATGGCAATCCAGTTGACTATTGATTTAAAGCCTGATTTACCCAGGGAGGCAGAAAGAATAAATCGATGCAAGGGAAGAGTTTTCGCGTTGCAAGATGAACCTGAAGTGCCTAGGGTTTGGGATGTCTTGAGCAATGAGGAAGTGGTTGAGATAGTATCCTCAGCTCCATCCCGGGCATCAGCTGCAAGGATTCTTGTGGACTCTGCAGCTAATGAGTGGAAAATCAAATACCCGACGTCGAAAATTGATGACTGTGCTGTGGTTTGTTTATTTTTGGATGGTAAAATGGATGGTGAATCGGAAGACAAAGAGAAAGGCTTCTCATCGGCTACCAACCATAGTAACCACTCAAACACTGCAATTGAATCAGATGATGGGCAGAAATCTGAGCCTTCCTTGCAGAGAAACTTCACTGTCAGACCCTTGGAAGATAAGAATACTTATGCGCAACTACTTACTGAAGTTAGAGACGTAACATCATCAACTGAAGATCAAAACTGGTCAGGGTTGGAAGGTGTCACTCGGGTGAACTCATTGGTTCAACTTCCTAGATTTTCTGTTGAAAGGGGTAACTCTTGA 1263 0.4394 MGGCVSTSSQSTGSSRSTGETVSPSCMEITFCGQKKTRKTLPDHVVSLQHLSSIPNRLFTNGKTRTSCIFTQQGRKGINQDALIVWEDFMSEDVIFCGVFDGHGPHGHHVARKVRDVLPIKLLSLLDTSQSRQDGPGTTCFKEKQKKLDGGETKKDCSAEENLNSIWKEAFLKSYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGNIGDSRAIMGSKDNNNSMMAIQLTIDLKPDLPREAERINRCKGRVFALQDEPEVPRVWDVLSNEEVVEIVSSAPSRASAARILVDSAANEWKIKYPTSKIDDCAVVCLFLDGKMDGESEDKEKGFSSATNHSNHSNTAIESDDGQKSEPSLQRNFTVRPLEDKNTYAQLLTEVRDVTSSTEDQNWSGLEGVTRVNSLVQLPRFSVERGNS* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00524 420 ProSiteProfiles PPM-type phosphatase domain profile. 66 320 IPR001932 -
Pte1g00524 420 CDD PP2Cc 72 320 IPR001932 -
Pte1g00524 420 Gene3D - 267 333 IPR036457 -
Pte1g00524 420 SMART PP2C_4 50 318 IPR001932 -
Pte1g00524 420 MobiDBLite consensus disorder prediction 1 22 - -
Pte1g00524 420 Pfam Protein phosphatase 2C 92 256 IPR001932 -
Pte1g00524 420 MobiDBLite consensus disorder prediction 328 368 - -
Pte1g00524 420 SUPERFAMILY PP2C-like 58 322 IPR036457 -
Pte1g00524 420 MobiDBLite consensus disorder prediction 338 368 - -
Pte1g00524 420 PANTHER PROTEIN PHOSPHATASE 267 318 IPR015655 GO:0004722|GO:0006470
Pte1g00524 420 Gene3D - 54 266 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00524 Pte-Chr1 6188690 6190748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00524 1 416 PP2C-type Phosphatase Gene Family AT1G03590 57.474 5.31e-175 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00524 - - qsa:O6P43_000691 644.81