Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00514 ATGAAAAAAAAACATTACATAAATAAAAAAGACACCAACCAACCAATTAGATTAGTAAAGAAAAAAAAAAACCCCCACACACACATCCAACTTGGCTCATGCTATGGCAAGCTGCCCGTTAATCTTGTCCTCTCCTGCCTCCTTGACTCCTTGTATAAAACTGTCACTCCCTTCGCTTTGATCCATCTCCCTAAAAACCCAAAATTTCAGTACTGCCTGCTCTTTCAAGTAAGAGAAAAAATGAGCAAGCTGAAACAAGTCTTTGCCACTGTATCAGACTCTAGCAAACACATTTCCATGTCTAGAAAAAACAAGAAGCTCCTCCTAGCTCTTTCTGCTACATTATTTCTTGCTGCTGCTATTGTTGGCATTGTTGCCGGTGTGAATTCTCACAAGCATTCAAGTGATGACAATGTCACATCCTTTTCTTCACATGCCATTGTTAAAAGCTCATGTAGTAGCACACGGTACCCAGAGCTATGCTTTTCTGCCATAGCAAATGCTCCTGCGGCTGCCAAAGTCAATCTGTCTAGCCAAAAGGATGTGATAGAAATATCCTTGAATCTAACCACTGAGGCAGTGGAGCATAACTATTTTGGCATCAAAAAGATTATCCAAACTAACGAAAACCTTACCCCACGTGAGAAAACTGCTCTACATGATTGCTTGGAAACCATAGATGACACCCTTGATGAACTTCATAAAATCAAGGAAGATCTCCATGAATACCCCAACAAGAAATCTCTGTACCAACATGCTGATGATCTGAAAACCTTGATAAGTTCTGCAATAACGAACCAGATCACTTGCTTGGATGGTTTCTCACATGATGCAGCAGATAAACACATCAGAAAAGCTCTCGAAAAAGGTGAGGTACACGTAGAGCATATGTGCAGCAATGCATTGGCTATGATCAAGAACATGACTGATAGTGACATAGCCAATTATGAGGACAAGTTTAAAACCAATGGCAGAAAGCTTAGGGAGGTGGACAATCATAGAGACGAGATTCAGTGGCCGGAATGGTTGTCAGCCAGCGACAGGCGTATTTTACAATCATCTACAGTGAAGCCGGATGTGGTGGTGGCTGCTGACGGCAGTGGAAACTTCAGGTCTGTGTCTGCAGCAGTGGCTGCTGCCCCAGAAAAGAGTAGCAAAAGATACATCATTAGAATCAAAGCAGGTGTGTATAAAGAAAACGTGGAGGTACCTAAGAAAAAGACTAATATTATGTTCATGGGTGATGGGAGAACAAACACTATCATCACAGGTAGCAGAAATGTTGTTGATGGCAGCACAACCTTCCATTCTGCGACAGTAGCTGTTGTAGGTGAAAGATTCCTAGCAAGAGATATAACATTTCAGAACGCAGCAGGACCTTCAAAGCACCAAGCGGTTGCACTACGTGTGGGTGCTGATTTCTCAGCCTTTCACCGCTGTGACATTGTGGCATACCAAGACACACTCTATGTCCACAACAACCGCCAATTCTTTATGAGCTGTTTCATATCAGGAACCGTAGATTTCATCTTTGGAAACTCAGCAGTTGTTTTCCAAGACTGTGACATTCATGCAAGGCGTCCAGGTGCAGGCCAGAAGAACATGGTGACAGCACAAGGCCGTGTAGACCCAAATCAAAACACGGGCATTGTCATTCAGAAGTCTAGGATTGGAGGCACTGCAGATTTGCAAGCTGCGAAAGGCAGTTTCAAAACATTTCTTGGTAGGCCATGGAAGGAGTACTCAAGGACAGTCATCATGCAGACAACAATAAGTGATGTGATTGATCCTGCCGGATGGCATGAATGGAGCGGCAATTTTGCATTGAACACATTGTTTTATGGAGAGTATCAGAACACTGGAGCAGGGGCAAGCACCTCAAGGAGGGTTAACTGGAGAGGGTTCAAGGTGATCACCAGTGCTACTGAAGCTCAAGCTTATACTCCTGGAAGGTTCATTGCAGGTGCCAGCTGGTTAGGTTCTACTGGTTTTCCATTCACACTTGGGTTGTAA 2013 0.4352 MKKKHYINKKDTNQPIRLVKKKKNPHTHIQLGSCYGKLPVNLVLSCLLDSLYKTVTPFALIHLPKNPKFQYCLLFQVREKMSKLKQVFATVSDSSKHISMSRKNKKLLLALSATLFLAAAIVGIVAGVNSHKHSSDDNVTSFSSHAIVKSSCSSTRYPELCFSAIANAPAAAKVNLSSQKDVIEISLNLTTEAVEHNYFGIKKIIQTNENLTPREKTALHDCLETIDDTLDELHKIKEDLHEYPNKKSLYQHADDLKTLISSAITNQITCLDGFSHDAADKHIRKALEKGEVHVEHMCSNALAMIKNMTDSDIANYEDKFKTNGRKLREVDNHRDEIQWPEWLSASDRRILQSSTVKPDVVVAADGSGNFRSVSAAVAAAPEKSSKRYIIRIKAGVYKENVEVPKKKTNIMFMGDGRTNTIITGSRNVVDGSTTFHSATVAVVGERFLARDITFQNAAGPSKHQAVALRVGADFSAFHRCDIVAYQDTLYVHNNRQFFMSCFISGTVDFIFGNSAVVFQDCDIHARRPGAGQKNMVTAQGRVDPNQNTGIVIQKSRIGGTADLQAAKGSFKTFLGRPWKEYSRTVIMQTTISDVIDPAGWHEWSGNFALNTLFYGEYQNTGAGASTSRRVNWRGFKVITSATEAQAYTPGRFIAGASWLGSTGFPFTLGL* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00514 670 ProSitePatterns Pectinesterase signature 2. 503 512 IPR033131 -
Pte1g00514 670 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 147 309 IPR035513 -
Pte1g00514 670 NCBIfam pectinesterase inhibitor domain 143 308 IPR006501 GO:0004857
Pte1g00514 670 ProSitePatterns Pectinesterase signature 1. 384 403 IPR018040 -
Pte1g00514 670 Pfam Plant invertase/pectin methylesterase inhibitor 147 304 IPR006501 GO:0004857
Pte1g00514 670 SMART PMEI_2 143 304 IPR006501 GO:0004857
Pte1g00514 670 Gene3D - 352 670 IPR012334 -
Pte1g00514 670 FunFam Pectinesterase 353 670 - -
Pte1g00514 670 PANTHER PECTINESTERASE 121 660 - -
Pte1g00514 670 Pfam Pectinesterase 359 655 IPR000070 GO:0030599|GO:0042545
Pte1g00514 670 CDD PMEI-like_3 150 309 - -
Pte1g00514 670 Gene3D Invertase/pectin methylesterase inhibitor family protein 143 309 IPR035513 -
Pte1g00514 670 FunFam Pectinesterase 144 309 - -
Pte1g00514 670 SUPERFAMILY Pectin lyase-like 354 669 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00514 Pte-Chr1 5976635 5979834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00514 102 671 Carbohydrate Esterase AT3G14310 71.624 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00514 K01051 - qsa:O6P43_018475 862.062