Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00501 ATGGCAAATGGAAAAGAGAACGGCAGTGACTTCTACGCAGTGTTGGGGTTGGATAAAGATTGCACCCCTTCTGAGCTCAGAAATGCCTATAAGAAACTTGCACTGGAATGGCACCCAGATCGTTGTTCGGCCCCAGGGAATTCAAAGTTTGTTGAAGAAGCTAAGAAGAAATTCCAAACAATCCAGCAAGCCTATTCTGTTCTATCTGACGCAAACAAAAGACTCATGTACGACGTAGGCGTTTATGACAGCGATGATGATGAAAATGGAATGAGTGACTTCTTGAACGAGATGGCGGCAATGATGAGCCAAACGAAACCCAGCGAAAATGGAGGAGATGAGAGCTTTGAGCAGTTCCAAGAGCTGTTTGAAGAAATGCTTCAAGGAGACATGGGGGCATTTGCTAGTAACTCTAATTCTGCAACTGCTGGTTCCACTACCTCATCGTCGTCCATATACACTAGCTATTCTGCCTCATTCAACAATTGCAATTCTTCTGAAATGAGTTTTGGGAATTCTGACCATTCAAACAGCTATGCTTCCAACTATCAGAGTATCCATTTTGGGAAAGATGAATCACAGAAAACATATGAGGAAGGGAAAGGTAGGAGGAGGAGCTCCAGCATGGGCCAGCCATAG 639 0.4429 MANGKENGSDFYAVLGLDKDCTPSELRNAYKKLALEWHPDRCSAPGNSKFVEEAKKKFQTIQQAYSVLSDANKRLMYDVGVYDSDDDENGMSDFLNEMAAMMSQTKPSENGGDESFEQFQELFEEMLQGDMGAFASNSNSATAGSTTSSSSIYTSYSASFNNCNSSEMSFGNSDHSNSYASNYQSIHFGKDESQKTYEEGKGRRRSSSMGQP* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00501 212 CDD DnaJ 10 70 IPR001623 -
Pte1g00501 212 PANTHER PUTATIVE, EXPRESSED-RELATED 2 190 - -
Pte1g00501 212 Pfam DnaJ domain 10 78 IPR001623 -
Pte1g00501 212 SUPERFAMILY Chaperone J-domain 7 80 IPR036869 -
Pte1g00501 212 PRINTS DnaJ domain signature 53 73 IPR001623 -
Pte1g00501 212 PRINTS DnaJ domain signature 30 45 IPR001623 -
Pte1g00501 212 PRINTS DnaJ domain signature 12 30 IPR001623 -
Pte1g00501 212 MobiDBLite consensus disorder prediction 191 205 - -
Pte1g00501 212 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Pte1g00501 212 SMART dnaj_3 9 73 IPR001623 -
Pte1g00501 212 MobiDBLite consensus disorder prediction 181 212 - -
Pte1g00501 212 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Pte1g00501 212 Gene3D DnaJ domain 8 140 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00501 Pte-Chr1 5861286 5864219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00501 12 78 C2H2 Transcription Factor Family AT1G74250 45.588 1.27e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00501 - - qsa:O6P43_018445 241.891