Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00482 ATGGCCAAATCTCTATACATGGGTGACAGCAGAAGATCCATGAAAGCACATGCAGAGAAACCAACTTTCACTCAGACTTGCAAACTCCTCAGCCAGTTCATGAAGGAGAAGCGTTTTGCTATTGATTCAAGCAAAGGACCTCCAGCAATATCGGAACATAAAGCAAAGACGAGGAACTTGTTGACAACCATGGAAAACTCAGATGATGCTTCTAAAGCGATTGCTGCAGTTATGAATTGCGTTCCACGATTTATTCAGAACTCTACGAACAACAATGAATCTGATTCCAGTGGAAAAGATCAGTTGACCATATTTTACTGTGGGAAAGTCCTAGTTTTAAATGACTTTCCAGCAGAAAGTGCCACTGAGGTCATGGAAATGGCAAGCAAGCTGAGTTCTAACGTTTCCGCCAATGGAAAAAGCTCAAACCAGTACAGCTCCTATTCCTCCTGA 453 0.4238 MAKSLYMGDSRRSMKAHAEKPTFTQTCKLLSQFMKEKRFAIDSSKGPPAISEHKAKTRNLLTTMENSDDASKAIAAVMNCVPRFIQNSTNNNESDSSGKDQLTIFYCGKVLVLNDFPAESATEVMEMASKLSSNVSANGKSSNQYSSYSS* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00482 150 MobiDBLite consensus disorder prediction 131 150 - -
Pte1g00482 150 ProSiteProfiles Tify domain profile. 95 130 IPR010399 -
Pte1g00482 150 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 16 138 IPR040390 -
Pte1g00482 150 MobiDBLite consensus disorder prediction 1 20 - -
Pte1g00482 150 Pfam tify domain 97 129 IPR010399 -
Pte1g00482 150 SMART tify_2 95 130 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00482 Pte-Chr1 5544902 5546663 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00482 1 134 Tify Gene Family AT1G19180 31.875 1.14e-10 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pte1g00482 tify 4.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00482 K13464 - gmx:100778559 114.775