Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00476 ATGGATGATTCTCCTGGAAATGTTGAGTTAGCTTTTGACAAAGCTGAGAAGGTAATACTAAGGTGGGACTCCTCTATTTCTGAAGAAGCCAGAGAAAAAATGATCTTTGATGGTGATCGTCAAGATGTTGATCTCTACTTACAAGCTGTTGATGAAATACGGAAGTCCATGTCTTCAACTTGTATCTCTGATGATGGGAAGACCAAAGTCAACATAGCTATTCAGATCGCCATGGCTCGCCTTGAGGATGAGTTTCGCAGCATACTCGTCCATCATACGAATCCTATTGAAGCTGATTCTCTTATTGATCCTAGCTCTTCTCTTCAGTCTAGCTCTTCCCATGGTGATGGAGGAGCTGAGTTTCAAGATGAGACTAATGTTGAAGATGAAGAAGATTGCGATACTCCTACTTCTTTGATCAAAGGGGAGGAATTACTTCGTCATAGCATTAGTGGAATGTCAAGTGTTGCTAGTGGAAGCTATCGATCCTCCAGCAGTGTTCGTGAGATCGATCTGATACCTTGTGAAGCCATTGATGATCTTAGAAGCATAGCTGAGAGGATGATCTCATCTGGGTATTTGAGGGAGTGCATCCAGGTATATGGCAGTGTGAGAAAATCAGCAGTCGATTCAAGCTTTAGGAGACTTGGAGTTGAGAAATTGAGCATAGGTGACATTCAGAGGTTGGAGTGGGACCAACTTGAAGTTAAGATTAGAAGGTGGATAAGGGCTGCTAAGGTTTGTGTTAGAATATTGTTTGCAAGCGAGAAGAAGCTCTGTGAGCAAATTTTTGATGGGGTTGGTACTGCTATTGATGATACTTGCTTTATGGAAACAGTTAAAGGTCCAGCTATTCAGCTGTTCAATTTTGCTGAGGCTATTAGTATAAGCAGGAGATCTCCTGAGAAGTTGTTTAAGATTTTGGACCTTCATGATGCTTTGATGGATTTGATGCCTGATATAGACGTTGTATTTGAGTCAAAATCATCAGAATCAATTCGAATTCAAGCAGCTGAGATACTGTCTAGGCTAGCAGAAGCAGCTAGAGGAACTTTATCAGAGTTTGAGAGTGCTGTGCTTCGTGAACCGTCAAAGGTTCCAGTGCCAGGTGGGACAATTCACCCCTTAACAAGGTATGTGATGAATTATATAAGTTTGATATCTGATTACAAGCAAACCATGAGTGAGCTTATTGTGTCAATACCATCTACGGGGTCAAGGTATTCGGGTGATCCATCGACCCCAGATATGGATTTCAGTGAATTGGAGGGCAGAGCCCCATTGGCAATTCATTTAATTTGGATAATCGTGATTTTGCAATTTAATCTGGATGGCAAGTCTAAGCACTATAAGGATGCATCTTTGTCTCATTTGTTTATGATGAATAACGTTCACTACATTGTTCAAAAGATTAAGGGTTCTCCTGAACTCCGGGAGATGATTGGGGATGATTATTTGAAGAAGCTCACGGGAAAATTCCGGCAGGCTGCTACTAATTATCAGAGAGCAACTTGGGTCAGGGTCTTGTATTGTTTGAGAGATGAGGGTTTGCACGTGAGTGGGAGTTTTTCTTCTGGAGTTTCAAAGAGTGCTTTGAGAGAAAGGTTTAAGGCCTTCAATGCGATGTTTGAAGAGGTGCACAGAACTCAAGCAACTTGGTTGATTCCTGATTCTCAGTTAAGGGAAGAGCTTCGCATATCCATATCTGAAATAGTGATCCCAGCTTATAGGTCATTTCTAGGCCGGTTCAGGAGTCATATAGAGAGTGGTAAGCATCCAGAGAACTACATTAAATACTCAGTTGAAGATCTGGAGAATGCTGTCTTGGATTTTTTTGAAGGTTATCCTGTTTCTCAAAATTTGAGGAGAAGATCTCATTGA 1881 0.4136 MDDSPGNVELAFDKAEKVILRWDSSISEEAREKMIFDGDRQDVDLYLQAVDEIRKSMSSTCISDDGKTKVNIAIQIAMARLEDEFRSILVHHTNPIEADSLIDPSSSLQSSSSHGDGGAEFQDETNVEDEEDCDTPTSLIKGEELLRHSISGMSSVASGSYRSSSSVREIDLIPCEAIDDLRSIAERMISSGYLRECIQVYGSVRKSAVDSSFRRLGVEKLSIGDIQRLEWDQLEVKIRRWIRAAKVCVRILFASEKKLCEQIFDGVGTAIDDTCFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLMPDIDVVFESKSSESIRIQAAEILSRLAEAARGTLSEFESAVLREPSKVPVPGGTIHPLTRYVMNYISLISDYKQTMSELIVSIPSTGSRYSGDPSTPDMDFSELEGRAPLAIHLIWIIVILQFNLDGKSKHYKDASLSHLFMMNNVHYIVQKIKGSPELREMIGDDYLKKLTGKFRQAATNYQRATWVRVLYCLRDEGLHVSGSFSSGVSKSALRERFKAFNAMFEEVHRTQATWLIPDSQLREELRISISEIVIPAYRSFLGRFRSHIESGKHPENYIKYSVEDLENAVLDFFEGYPVSQNLRRRSH* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00476 626 Pfam Exo70 exocyst complex subunit 240 608 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pte1g00476 626 Gene3D Exocyst complex component Exo70 21 116 - -
Pte1g00476 626 Gene3D Exocyst complex component Exo70 119 622 - -
Pte1g00476 626 PANTHER EXOCYST COMPLEX PROTEIN EXO70 7 614 IPR004140 GO:0000145|GO:0006887
Pte1g00476 626 SUPERFAMILY Cullin repeat-like 40 613 IPR016159 -
Pte1g00476 626 MobiDBLite consensus disorder prediction 100 119 - -
Pte1g00476 626 MobiDBLite consensus disorder prediction 100 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00476 Pte-Chr1 5486130 5490465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00476 11 627 EXO70 exocyst subunit family AT1G72470 70.740 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00476 K07195 - qsa:O6P43_018425 1001.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00476 1 5486130 5490465 Pte1g00476 1 5486130 5490465 RCT