Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00466 ATGACTCTTGAAGAATTACTGGCCAACCCCACATCAGATCAGATACTAGACTGGCTTGGACTGGGGGAATCGGTTTCATTGCTTCCGTCATTGTTGGATGATCCATACAATCCAGATGATATTAACAATTGTCAATGGTGGAGTCAAACACAAGATATAGCTCAGGCTCTAATTTCTAGTGCAGCTACGAATTGTGCAAATAACACAAGCTGTCTTGCCACCCTTAACGCCATAACTCCGAACACAATCGACATTTCTAATCAAATACCATCTTCTGAGTTATCTAAGAAACGAAAATTTTGCGATAACTCTTCATCCAAACCTTCCCAAACTCAGCAACCGAAGCGAAACCAGAGCCGGAAGGCAATTGAAGCTGCTGATAGTGGGGATGGAATTGTTGGAGTTAAGAAGTTAGTGAAGAAAGGTGCTGGCAGGGGCAACGGATACAACGGTAATAACAAAGAAGGCAGGTGGGCAGAGCACTTGCTCAATCCTTGTGCTGCAGCCATCACTGCAGGTGACCAGAGCCGAGTGCAACACTTCTTATATGTTCTCCATGAGCTTGCATCCACAACTGGCGATGCCAATCACCGGCTAGCTGCTTATGGTCTAAGAGCACTGAAATATCACCTGTCTTCAAACTCACCTAACTTTGCCGGCAGCTTTGTTTCTACTGAACCAAGGTTCTTTCAGCGATCTTTAATGAGATTTGATGAGGTCAGTCCCTGGTTTGCTTTGCCAAATAACATTGCAAACTCTTCAATCCTTCAAATTCTTGCTGAGGAACAGCCAAAACATTCTCATAGTGTTCTTCACATCCTTGATATTGGAGTCTCTCATGGTGTGCAATGGCCAACACTGCTAGAGGCCCTGACACGCCGACCTGGGGGTCCTCCTACATTAGTTCGTCTCACTGTTGTTGCTGGTAGCACCGAGAACGGCCAAAACAATGAGACCCCATTTTCAAAAGGTCCACCAGGTGTCAATTTCTGCTCTGCGCTCCTGAGTTTCGCCAAGTCCATGAACATTAATCTGCAAATAAACAGACTTGATAACCAGCCATTAAAAAATCTAACTTCGGAGATGATAAAAACCTCCACTGATGAGACTTTGATCATCTGTGCACAGTTTCGCCTCCACCACCTGAATCATAATGTGCCTAATGAAAGGACAGAGTTCTTGAGAGTCCTGAGGAGTATGGAACCAAACGGGGTAATACTAAGTGAGAACAACATGGAATGCGCCTGCAGTAGTTGTGAGAAATTTGACACCAGCTTCAGCAGGAGAGTGGAGTACATGTGGAGGTTTCTGGACTCCACAAGCTCGGCATTCAAGGGACGGGAAAGCGAGGAAAGGAAGATGATGGAAGGAGAGGCAGCAAAAGCACTGACGAGCCGCGGTGAAATGAATGAAAGAAAAGAGAAATGGTGTGAAAGAATGAAAAATACAGGGTTTACACCAGAGATTTTTGGTGAGGACGTTATTGATGGGGCCAGGGCTTTGTTGAGGAAGTATGACAGCAATTGGGAAATGAGATCAGATACGAATGATATGTGTGTAGGGCTTTGGTGGAAAGGTCAGCCAGTATCTTTCTGTTCATTATGGAAGTCAGATATCTAA 1620 0.4488 MTLEELLANPTSDQILDWLGLGESVSLLPSLLDDPYNPDDINNCQWWSQTQDIAQALISSAATNCANNTSCLATLNAITPNTIDISNQIPSSELSKKRKFCDNSSSKPSQTQQPKRNQSRKAIEAADSGDGIVGVKKLVKKGAGRGNGYNGNNKEGRWAEHLLNPCAAAITAGDQSRVQHFLYVLHELASTTGDANHRLAAYGLRALKYHLSSNSPNFAGSFVSTEPRFFQRSLMRFDEVSPWFALPNNIANSSILQILAEEQPKHSHSVLHILDIGVSHGVQWPTLLEALTRRPGGPPTLVRLTVVAGSTENGQNNETPFSKGPPGVNFCSALLSFAKSMNINLQINRLDNQPLKNLTSEMIKTSTDETLIICAQFRLHHLNHNVPNERTEFLRVLRSMEPNGVILSENNMECACSSCEKFDTSFSRRVEYMWRFLDSTSSAFKGRESEERKMMEGEAAKALTSRGEMNERKEKWCERMKNTGFTPEIFGEDVIDGARALLRKYDSNWEMRSDTNDMCVGLWWKGQPVSFCSLWKSDI* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00466 539 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 120 524 IPR005202 -
Pte1g00466 539 MobiDBLite consensus disorder prediction 94 126 - -
Pte1g00466 539 Pfam GRAS domain family 160 536 IPR005202 -
Pte1g00466 539 ProSiteProfiles GRAS family profile. 150 536 IPR005202 -
Pte1g00466 539 MobiDBLite consensus disorder prediction 104 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00466 Pte-Chr1 5361695 5363831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00466 1 536 GRAS Transcription Factor Family AT3G13840 50.090 3.82e-166 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte1g00466 GRAS 9.3e-74 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00466 - - qsa:O6P43_018403 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00466 1 5361695 5363831 Pte1g00466 1 5361695 5363831 RCT