Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00464 ATGATGAGCAGTGTTGGAAGTGCAAGCACAAGTGCAAGTACAAGAAATAGGTCTCCTTTCACAGCTGCTCAGTGGCAAGAGCTTGAACACCAAGCTCTCATTTTCAAGTACATGATCTCAGGCATGCCTATCCCACCTGAACTCATCTATTCAGTTAAAAGAAGCTTGGAGTCTTCAACCTCTTCAAGGTTCTTTCCAACCCAACACCCCGTGGGATGGGGATGTTTTGATATGAGTTTTGGCAGAAAAGTAGACCCAGAGCCAGGGAGGTGCAGAAGAACAGATGGCAAAAAATGGAGATGCTCAAAGGAGGCATTTCCAGATTCCAAGTACTGTGAAAAACACATGCATAGAGGCAGACACCGTTCAAGAAAGCCTGTGGAAGTTGCTGCTCCTACTCCTACTGCTACAACCAACAACACAACAACCAACACCGCCATCACCTCACCATCAATCTCTTCAATGAACAAAAACATTTCCCTAAGCAACAACCCTGACACATCTACTACTCCTTTCTCTTTCTCTCCATTGTCTTCGTACCCTTATCCATGTCAAAATCCTTTCTTAGCTGCAACCTCAACCTATTCCAGAACACCTGGTTCTGATTTTTCGAATCAAAGCAATGCCAACACTATTCCTCATCTATTTCTGGATTCTAGCTCTTATTCACCCGCAGGAAAAGAATACAGTCGTGATCATGGAATTAAAGGTGTGGACGAGCTAGCATTTTTTCCAGAAGCTTCAGGGACATCGACAAGTTATGCTGAATCATATAACCGACATTTGACAATGAGTTCTTTTAACAAAGGTTATTCTTCACAGTCTCATCACCAAAGTTCAACTGTCAGTTATAATAACCAAAGGCAACAAGAGCAGCAACATTGTTTTGTTCTAGGCACTGACTTCAAATCTCAAAGAATGGATAAAACTGACAAAGAGCCAATAGTTGGTGACACACAGAAACCACTTCACCACTTCTTTGGCGAGTGGCCTCCTAAAGACGCAGACTCCTGGCTTGATCTCGCTTCCAGTACTTCCAGAATCCCACATGATGACTAA 1059 0.4315 MMSSVGSASTSASTRNRSPFTAAQWQELEHQALIFKYMISGMPIPPELIYSVKRSLESSTSSRFFPTQHPVGWGCFDMSFGRKVDPEPGRCRRTDGKKWRCSKEAFPDSKYCEKHMHRGRHRSRKPVEVAAPTPTATTNNTTTNTAITSPSISSMNKNISLSNNPDTSTTPFSFSPLSSYPYPCQNPFLAATSTYSRTPGSDFSNQSNANTIPHLFLDSSSYSPAGKEYSRDHGIKGVDELAFFPEASGTSTSYAESYNRHLTMSSFNKGYSSQSHHQSSTVSYNNQRQQEQQHCFVLGTDFKSQRMDKTDKEPIVGDTQKPLHHFFGEWPPKDADSWLDLASSTSRIPHDD* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00464 352 MobiDBLite consensus disorder prediction 132 151 - -
Pte1g00464 352 SMART QLQ_2 18 54 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pte1g00464 352 Pfam QLQ 19 51 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pte1g00464 352 ProSiteProfiles WRC domain profile. 85 129 IPR014977 -
Pte1g00464 352 PANTHER GROWTH-REGULATING FACTOR 5 9 343 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pte1g00464 352 MobiDBLite consensus disorder prediction 115 151 - -
Pte1g00464 352 ProSiteProfiles QLQ domain profile. 19 54 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pte1g00464 352 Pfam WRC 86 128 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00464 Pte-Chr1 5346247 5348730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00464 1 329 GRF Transcription Factor Family AT3G13960 37.731 4.07e-62 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pte1g00464 WRC 1.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00464 - - qsa:O6P43_027547 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00464 1 5346247 5348730 Pte1g00464 1 5346247 5348730 RCT