Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00456 ATGTTGACTTGTATTGCTTGTTCGAAGCAGCTCAACAATAGATCACTACAACGACAGGAGAATGACATTGTCGGAACACCAAGTACCAAGAATGCTGTCAAGGCCCTTACAGCTCAGATCAAAGAAATAGCACTGAAAGCTTCAGGCGCATATAAGAATTGCAAGCCATGTTCAGGTTCATCAAACGACGGTCAAAATAGAGACTTTTCCGAGCCTGATACAGCATCACAGTCTGCGAGGTTCCACAGTCCTTATCGTACAACTGGGAGCTCAAATTCTACACCTAGGCTCTGGGGGAAAGAAATGGAGGCAAGGTTGAAAGCTCTTTCAAGTGGGCAGGGAACGCCAGCATCAGTTAGTGATCGTACTGAGTCAATTGCCCTAATGGAGGAAGATGAACCAAAGGAATGGGTGGCACAAGTCGAGCCTGGTGTGCTGATTACATTAGTTTCTTTGCCCGAAGGAGGGAATGACTTGAAACGTATTCGGTTCAGCCGTGACATGTTCAGTAAATGGCAAGCTCAAAGATGGTGGGAAGAAAATTATGAAAAGATCATGGAACTATACAATGTTCAAAGATTTAATCAACAAGGAGTGCCCCCTCCAACTACACCTAGATATGAAGATGAGAGTTCAAAGATTGAATCTCTCAGGGACATTCCTGTTACTCCTACTCTGAGAAGGGACCCAATGGGAGCAGGCTACTCTTCGTCTGATTCACTTGATCACCAGGCAACGCAAGCTCGGCATTACGATGATACCACTGGTCTTGCTTCGACACCCAAACTGCCTGACATTACTGGGGTGAAGACTGAGGCACCATCATTAGATGGTTCTGCAAGGAATAGTTCATCATCGGGGACAGATCACTCAGGCGAGCTTTCGGTCAGCAATGCCAGCGATATGGAGACTGAATGGGTAGAACAAGATCAACCAGGTGTTTACATCACTATAAGACAACTGCCTGGTGGAACTCGGGAACTTAGGCGTGTTCGGTTTAGCCGAGAACGGTTTGAAGAGTCACAAGCCAGATTATGGTGGGAGCAGAATCGTGCGAGGATACAAGAACAGTATTTGTGA 1080 0.462 MLTCIACSKQLNNRSLQRQENDIVGTPSTKNAVKALTAQIKEIALKASGAYKNCKPCSGSSNDGQNRDFSEPDTASQSARFHSPYRTTGSSNSTPRLWGKEMEARLKALSSGQGTPASVSDRTESIALMEEDEPKEWVAQVEPGVLITLVSLPEGGNDLKRIRFSRDMFSKWQAQRWWEENYEKIMELYNVQRFNQQGVPPPTTPRYEDESSKIESLRDIPVTPTLRRDPMGAGYSSSDSLDHQATQARHYDDTTGLASTPKLPDITGVKTEAPSLDGSARNSSSSGTDHSGELSVSNASDMETEWVEQDQPGVYITIRQLPGGTRELRRVRFSRERFEESQARLWWEQNRARIQEQYL* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00456 359 Pfam Transcription factor regulating root and shoot growth via Pin3 135 189 IPR013591 -
Pte1g00456 359 Pfam Transcription factor regulating root and shoot growth via Pin3 303 358 IPR013591 -
Pte1g00456 359 Pfam Transcription factor BRX N-terminal domain 26 57 IPR027988 -
Pte1g00456 359 MobiDBLite consensus disorder prediction 195 299 - -
Pte1g00456 359 MobiDBLite consensus disorder prediction 237 254 - -
Pte1g00456 359 ProSiteProfiles BRX domain profile. 304 359 IPR013591 -
Pte1g00456 359 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 359 IPR044532 -
Pte1g00456 359 MobiDBLite consensus disorder prediction 276 299 - -
Pte1g00456 359 ProSiteProfiles BRX domain profile. 135 190 IPR013591 -
Pte1g00456 359 MobiDBLite consensus disorder prediction 56 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00456 Pte-Chr1 5124719 5128551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00456 1 360 Major Intrinsic Protein MIP AT1G31880 46.277 5.97e-93 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00456 - - zju:107403439 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00456 1 5124719 5128551 Pte1g00456 1 5124719 5128551 RCT