LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte1g00445	ATGAAGCAGAGTACCACTGAGCTTTGTGAATCAAAACCAGAAACAATGGAAGGAGACCATGTGGATAATACAACTGTGGTTGCCATCGATAGAGACAAGAACAGCCACCATGCTGTCATGTGGGCTGCGGACAACATTTTAGCCAAGAACTCAACTTGTGGCCTTATTCATGTTCTAACTCACAGCTTGCATCCTCAAGATACTGTCTCCAAAGAACCTCGACCACCAACTGAAGCAGAACAACAATTTTTTCTTCCTTTCCGAGGATTCTGTGCTCGAAAGGGGGTTGCAACAATGGAGTTGGTTCTCGATGATATTGACGTCTCAAAAGCACTCGCTCATTATGTTGCCAACAACTCCATCAACAATGTTGTTGTTGGTGCTTCTCACAGGAATGTACTCACAAGGAAATTCAAAAATCCAGATGTTCCATCATGTCTGCTCAAATCTTTGCCAGAGTCTTGTACATTATACGTTATATCCAAAGGAAAAGTACAAAATTTTCGTTGTGGAGTTCCATCGCGGAGCATTTCAATTGTGAAAGAAAAAGGCTTGACCGATGTAGCCACCCACATGAAACATTCTCAACAGGTCAAATCCCCTAGACCGCTTCTTGATAGTCCAGATTATGGAGATGCAAACAGGACAATGCTCAATATGTGGAGTTTTAGAAGCAAGGGATCTCTCGATGGGGTTGCTGATACTAAGCAACTGACACCAACCAAGTCTAAACGAAATTTTGATTCAATATTAGAATCAACAGAATGCCCCTCTACAGGCAATTCTCCACATCACGAGCCTCTACCAAGAAAGGGTGACATCTTAGAGCAACCTTCTTCTCAATCATCAGATATGTCCTGTGAAGCCTTTCCTGTGGTTCCTGAAAATTCCCAGACCACAAAAGCATTGGAAGCTGAGATGATGAGATTGAAACTTGATCTGGAACAAACCATGGATAAGTATCACTCTGTCTGCAGAGAAGCCACTACAGCAGACAAGGCGGCAAGGAGGCTTCAACTCCAGAGAGCAGAAGAAGAACGCAACTTAGTAGAAGCTAGGCTTGCTGAAGACGCTGCAGCATTTGCTCTGGCAGTATTAGAGAAGCAGAAAACCCAGGCTGCATTGGAATCGGTTCGTATATCAGAACGCCTGGTAGAAATGGAGATTCAGAAGAGGATAAAAGCAGAAATTAAAGTCAAGCTTGAGGAAGAAGAAAGAAAAGCACTGCGTTCAAAAACGCTATACAGTGTTAGATTCAGAAGATATACTATTGATGAGATAGAAAAAGTAACAAATTACTTCGAAGCTTCTTTTAAAATTGGAGAAGGGGGATATGGACCTGTCTATAAAGCAGTTCTTGATCACACTGAAGTTGCTATCAAAGTTTTGAGGCCAGACATATCCTGTGGACAGATGCAATTCCAGAGAGAGGTGGAGGTTTTGAGCAACATGAGGCATCCAAACATGGTTCTCCTCTTAGGTGCATGCCCCGAGTATGGATGCCTTGTGTATGAATACATGGAAAATGGCAGCTTAGAAGACAGGCTTCTGATGCAAAATGACACTCCCCCAATTCCTTGGAGAACAAGATTCAAAATAACAGCTGATATTGCCGCTGCCCTTAATTTTCTTCATCAGAAAAAACCAGAACCCCTTGTGCACCGTGATCTTAAGCCAGCAAACATTCTCTTAGACCACAACTACGTCAGCAAGATTGGTGATGTGGGATTGGCCAGGCTAGTTCCAGCATCTCTAGCTGATCAAACAACACAGTACTGCATAACAGCAGCAGCTGGCACATTTTGTTACATTGATCCAGAGTATCAACAGACAGGAAAACTAGGAGTGAAGTCCGATATTTATTCATTAGGTGTAGTGCTGCTGCAAATTATTACAGCAAAGCCTCCTATGGGATTGTCTCACCAAGTAGAGATGGCTATTGAAGAAGGGACATTTGCAGAGATGCTTGACCCAGCTGTAGTAGATTGGCCATTTGAAGAAACACTTTCTTTTGCTAAATTGGCTTTGAAGTGTTGCGAGCTCAGGAAGAGGGACAGACCGGACCTGAATTCTGTAATCTTGCCAGAGCTGAATCGTCTGAAACATCTTGCAATGAACGAAGAAACAACGGACATTCAATCAAACACATACAAGCCACTTCCACATCACTCATCAATTACTGAAGTGACTTGCAGTAAGATCAAATTGAAAACAAAGCAGTACCCCAGCAAATCCATTGCTAAATTGGGAAGCTTCAGTTGTAGTCGTGGGGTTTCAAGACTGTTGCCACCTACAACTGATATGCAAGAAGGGAAAGCAAGCAAGAAGTATACTGAAAGCTGCTGGTCATTTGTAAGTTGCTCCAACTTGCAAGAACCTCCATTGCAGAAATTCAAGTCATTTGTGAGTTGCTCCAAACATGAGCCTCCATTACAGAAATTCAATTCATTCATGTATTGA	2460	0.4256	MKQSTTELCESKPETMEGDHVDNTTVVAIDRDKNSHHAVMWAADNILAKNSTCGLIHVLTHSLHPQDTVSKEPRPPTEAEQQFFLPFRGFCARKGVATMELVLDDIDVSKALAHYVANNSINNVVVGASHRNVLTRKFKNPDVPSCLLKSLPESCTLYVISKGKVQNFRCGVPSRSISIVKEKGLTDVATHMKHSQQVKSPRPLLDSPDYGDANRTMLNMWSFRSKGSLDGVADTKQLTPTKSKRNFDSILESTECPSTGNSPHHEPLPRKGDILEQPSSQSSDMSCEAFPVVPENSQTTKALEAEMMRLKLDLEQTMDKYHSVCREATTADKAARRLQLQRAEEERNLVEARLAEDAAAFALAVLEKQKTQAALESVRISERLVEMEIQKRIKAEIKVKLEEEERKALRSKTLYSVRFRRYTIDEIEKVTNYFEASFKIGEGGYGPVYKAVLDHTEVAIKVLRPDISCGQMQFQREVEVLSNMRHPNMVLLLGACPEYGCLVYEYMENGSLEDRLLMQNDTPPIPWRTRFKITADIAAALNFLHQKKPEPLVHRDLKPANILLDHNYVSKIGDVGLARLVPASLADQTTQYCITAAAGTFCYIDPEYQQTGKLGVKSDIYSLGVVLLQIITAKPPMGLSHQVEMAIEEGTFAEMLDPAVVDWPFEETLSFAKLALKCCELRKRDRPDLNSVILPELNRLKHLAMNEETTDIQSNTYKPLPHHSSITEVTCSKIKLKTKQYPSKSIAKLGSFSCSRGVSRLLPPTTDMQEGKASKKYTESCWSFVSCSNLQEPPLQKFKSFVSCSKHEPPLQKFNSFMY*	820

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte1g00445	819	Gene3D	Phosphorylase Kinase; domain 1	414	506	-	-
	Pte1g00445	819	Gene3D	Transferase(Phosphotransferase) domain 1	507	719	-	-
	Pte1g00445	819	Gene3D	HUPs	23	160	IPR014729	-
	Pte1g00445	819	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	24	139	-	-
	Pte1g00445	819	MobiDBLite	consensus disorder prediction	232	261	-	-
	Pte1g00445	819	Coils	Coil	387	412	-	-
	Pte1g00445	819	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	407	506	-	-
	Pte1g00445	819	Coils	Coil	300	320	-	-
	Pte1g00445	819	ProSiteProfiles	Protein kinase domain profile.	434	705	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte1g00445	819	Pfam	Protein kinase domain	437	691	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte1g00445	819	MobiDBLite	consensus disorder prediction	232	287	-	-
	Pte1g00445	819	PANTHER	OS02G0152300 PROTEIN	26	715	-	-
	Pte1g00445	819	Pfam	Universal stress protein family	26	136	IPR006016	-
	Pte1g00445	819	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	552	564	IPR008271	GO:0004672\|GO:0006468
	Pte1g00445	819	SUPERFAMILY	Protein kinase-like (PK-like)	411	693	IPR011009	-
	Pte1g00445	819	CDD	STK_N	24	163	-	-
	Pte1g00445	819	SMART	serkin_6	434	705	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte1g00445	819	Coils	Coil	328	360	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte1g00445	Pte-Chr1	5039218	5044158	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte1g00445	11	704	Receptor kinase-like Gene Family	AT1G78940	46.986	0.0	594

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Pte1g00445		Pkinase	4.1e-42	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte1g00445	-		-	qsa:O6P43_018341	788.875