Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00444 ATGGCGCACCAGTCCTCCGACAATGATTCATCTTCTGAGCGACGGTATTACAACCCATACAAAGACCTCGAAGTTCCTATGAAAAACCTGTATCAACTTCCCACGTCACCTGAATACCTTTTTGTTGAAGAAGCTCGAAGAAAGCATCGATCTTGGGGTGAAAATCTGACCTTTTACACCGGTTGCGGTTACCTCTCCGGTGCAGTCGCTGGAGCCGGTGCTGGTTTAGTGATCGGAGTGAAATCATTCGAATCTGGCGACACCACCAAGCTCCGGATTAATCGCGTGCTGAATTCGTCTGGTCATACAGGTCGGACCTGGGGAAACCGGTTGGGTGTCATTGGGCTGCTTTACGCTGGTACGGAAAGTGGGATTGCAGCTTTGAGGGGTACTGATGATGTATGGAATAGTGTGGCAGCTGGGTTAGGGACTGGTGCCTTGTACCGTGCAGCGAGAGGGGTGAGATCTGCTGCTGTTGCCGGAGCTGTCGGCGCAGCTTTGGTTGGTGTTGGCGTGACGGCGAAGCATGCCTTGAAGAGATATGTACCTATATGA 555 0.5171 MAHQSSDNDSSSERRYYNPYKDLEVPMKNLYQLPTSPEYLFVEEARRKHRSWGENLTFYTGCGYLSGAVAGAGAGLVIGVKSFESGDTTKLRINRVLNSSGHTGRTWGNRLGVIGLLYAGTESGIAALRGTDDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGAALVGVGVTAKHALKRYVPI* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00444 184 PANTHER TIM23 24 172 IPR045238 GO:0022857
Pte1g00444 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00444 Pte-Chr1 5033417 5035556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00444 2 185 Chloroplast and Mitochondria Gene Families AT1G72750 66.845 3.98e-79 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00444 K17794 - qsa:O6P43_027592 279.641