Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00442 ATGGAACCGCGTGTTGGGTACAAATTTCGACTGGGTCGGAAGATTGGTAGTGGGTCCTTTGGGGAGATCTATCTGGGGACTAATATTCAGACTAATGAGGAGGTTGCTATTAAGCTTGAAAATGTAAAGACTAAGCATCCTCAATTGCTCTACGAATCCAAGCTCTACAAGATATTGCAAGGAGGAACTGGAATTCCAAATATAAAATGGTTCGGAGTTGAAGGAGACTACAATGTTCTTGTGATGGATTTACTGGGACCTAGTCTGGAGGATCTATTCAATTTCTGTAGCAGGAAGTTCTCTCTGAAAACAGTTCTTATGCTTGCAGATCAGATGATAAACCGGGTGGAATTTGTTCATTCCAAATCATTTTTACATCGTGACATCAAACCTGACAACTTTTTAATGGGTTTAGGAAGACGTGCAAATCAGGTTTACATCATTGATTTTGGCCTGGCAAAGAAGTACAGAGACACCTCTACCCATCAACACATTCCTTACAGGGAGAACAAGAATTTGACTGGAACTGCAAGATATGCTAGCATGAACACTCATCTTGGCATTGAGCAAAGCCGGAGAGATGATTTGGAATCACTTGGTTATGTGCTCATGTATTTTTTGAGAGGAAGCCTCCCTTGGCAAGGGTTGAAAGCAGGAACTAAGAAACAAAAGTATGATAAAATCAGTGAGAAAAAAGTATCAACATCAATTGAGGCTCTGTGCCGTGGCTATCCTATGGAATTTGCATCTTACTTCCACTACTGTCGGTCACTTCGCTTTGAGGACAAACCTGATTATGCTTATCTGAAAAGACTTTTTCGTGATCTCTTCATTCGTGAAGGCTTTCAATTTGATTATGTCTTTGATTGGACTATATTGAAGTATCAGCAATCTCAGATTGCTGCCCCAAACTCACGTGCAAATGCTACTGGTGCTGGAACAAGTTCGGGAATGCCACAAGCTGCTGCAAATGCTGAGAGACAATCTGGTGAAGTTAGACCTAGTGGTTGGTCTCCATCAGATCCTATACGCAGGAGGAACTCTGGACCAATTGCTGGTGATGGAATCTATTCCAGACATAAAGCACCGATTGCAAATGAATCATCTGGTTCAAAAGATGCTATGTTATCCAGTTCTAATTTCTTGTGGTCAACCAATTCTTCAAGACGAGCTGCTGTATCTGGCAATCGGGATGCAGTGGTTCTTGGTAGTGAGCCTGACCCGTCACGAGGACTTACAATTGATGCTAGTCCTGGAGCACTTCCTGAAGTCTCTCATGCACAAAGGAGTTCACTAATTGAGTCATCTGGACATTGGAGTTCATCAGCAAGAATGCCTTCAAATGTGAAGAACATCGAGTCAACCTTGAGAGGCATTGAAAGCCTTCATTTTAGTAATGATGAGAGGGCACAGTATTAG 1419 0.4207 MEPRVGYKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYKILQGGTGIPNIKWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKFSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKVSTSIEALCRGYPMEFASYFHYCRSLRFEDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQIAAPNSRANATGAGTSSGMPQAAANAERQSGEVRPSGWSPSDPIRRRNSGPIAGDGIYSRHKAPIANESSGSKDAMLSSSNFLWSTNSSRRAAVSGNRDAVVLGSEPDPSRGLTIDASPGALPEVSHAQRSSLIESSGHWSSSARMPSNVKNIESTLRGIESLHFSNDERAQY* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00442 472 SUPERFAMILY Protein kinase-like (PK-like) 7 290 IPR011009 -
Pte1g00442 472 CDD STKc_CK1_delta_epsilon 8 282 - -
Pte1g00442 472 FunFam Casein kinase I isoform delta-like 1 308 - -
Pte1g00442 472 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pte1g00442 472 FunFam Putative Casein kinase I 1 85 - -
Pte1g00442 472 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00442 472 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00442 472 MobiDBLite consensus disorder prediction 306 323 - -
Pte1g00442 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pte1g00442 472 PANTHER CASEIN KINASE-RELATED 13 333 - -
Pte1g00442 472 Gene3D Transferase(Phosphotransferase) domain 1 2 333 - -
Pte1g00442 472 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00442 472 MobiDBLite consensus disorder prediction 306 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00442 Pte-Chr1 5008912 5014321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00442 7 223 EF-hand Containing Proteins AT2G17890 25.778 1.57e-13 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pte1g00442 Pkinase 8.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00442 K02218 - jre:109002012 783.867