Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00441 ATGACAAAGGGCAGGATAAGGGCAAAGCTCAGGAAGAGCCAACTCTACACATTTGGTTGCCTTGGGCAAAGGCCTCAACAGCATATTGAACCAAATTTGCTTGAAGGACCTGGCTACTCCAGAGTTGTGTACTGCAACCAGCCTACTCTCCATAAGACCAGTAATTTGTTCTACTGCAAGAATGATATATCCACAACAAAGTACAATGTCATCACTTTTATTCCCAAGGCACTCTTCGAACAATTTCGACGTGTTGCCAACATATATTTTCTTTTGGCTGCATGCCTTTCCCTCACTCCAATTTCTCCATTCAAAGCATTTAGCATGATTGCTCCTTTAGCTTTTGTTGTGGGGCTTAGTATGATTAAGGAAGCACTGGAAGATTGGAACAGGTTCCTCCAGGATGTTAAAGTCAATCGAAGGAAAGTTGATGTTCATAAAGGGAATGGTACCTTTGGACCAAGGCCATGGCAAAAAATTGAGGTAGGGGATGTGGTCAAAGTAGAAAAGGATCAGTTCTTTCCAGCAGACCTGCTTCTCTTGTCATCAAGTTATGAGGATGGAATTTGCTATGTGGAGACCATGAATTTAGATGGGGAGACAAACTTGAAACCAAAGAGATGTTTGGAGGTTACCTTGCCTTTAGATAATGATAAGATTTTCAAGGACTTCACAGGTACGATAAGATGTGAAGATCCAAACCCCAGTCTTTATACTTTTGTGGGGAACCTTGAGTATGACAGTCAGGTTCATCCTCTTGATCCCAGTCAGATTCTCCTCCGTGATTCGAAGCTCAGAAACACATCTTACATATACGGAGTGGCCATTTTCGGTGGTCATGATAGCAAAGTCATGCAAAACACTACAAAATCCCCTTCAAAGCGGAGCACCATAGAGAAAAAGATGGATTACATCATATACCTTCTTTTCACCCTCCTTCTTTTGATATCTTTAATCAGTTCAATAGGATTTGCTATATTAACCAAGTACAAAGCGCCGGATTGGTGGTACTTAAGGCCTGATGACATTGACAGACAATACGACCCAAAAAAGCCTGCCTTGGCTGGTTTTTCTCATCTGATCACTGCTCTCATCCTATATGGATATTTGATACCTATCTCACTCTATGTTTCAATTGAGGTTGTAAAGGTCTTACAAGCAACATTCATCAACCACGACCTTCAAATGTATGATGAAGAATCAGGGGTTGCAGCCGAAGCACGGACATCAAATTTAAATGAGGAATTGGGCCAGGTGGATACAATTCTCTCTGACAAAACTGGAACTTTAACCTGCAATCAGATGGATTTTCTGAAGTGCTCAATTGCTGGTACAGCATATGGCACCTGTCCAAGTGAAGTTGAAGTCGCAGCCGCGAAACAGATAGCTTATGATCTTGAGGAGCAGGAAACAGATCTTTCTAATTTCCCCACTCCTAAAACTAGTGAATGTGGTTCACCAAACAATTTAAGTGAACTTGAGAGTGTTATTACTTCCAAGGCTGAAGAGGAGTCCAAAAGTGCAATCAAGGGCTTTAGATTTGAGGATAGGCGGCTCATGAATGGTAACTGGTTGAAGGAGCCTAATATTGATGTTCTCTTCTTGTTTTTCCGAGTATTAGCCATTTGCCAAACTGCTATTCCTGACTTGAATGAGGAGACTGGTACTCTTACATATGAAGCAGAATCACCTGACGAGGCAGCTTTTCTTGTAGCTGCAAAAGAATTTGGGTTTGAGTTCTGTAAACGCACTCAATCAAGTGTTTCTATCCTAGAAAAGTACTCACCTTCAGGCCAGCCAGTTGAAAGGGAATACAAAATTCTGAATCTGTTAGATTTTACTAGCAAAAGAAAGCGAATGTCAGTAATTGTGCGTGATGAAGAGGGACAGATTTTTCTCTTGTGCAAAGGTGCCGACAGCATTATCTTTGATCGATTGTCAAAGAACGGACGAACGTTTCTGGAAGGAACAACTAAGCATTTGAATGAATATGGAGAAGCAGGTCTGCGCACACTGGCTCTTGCTTATAAGAAGCTTGACGAGCAAGAGTATTCTTCTTGGAACAATGAGTTTCAGAAAGCCAAAACAGCTATTGGCTCTGATAGGGAGGCAACACTCGAGCCTTTAGCGGATCAGATGGAAAGGGAGTTGATTCTTGTTGGTGCTACTGCTGTGGAAGACAAACTTCAGAAAGGGGTGCCTCAATGCATTGATAAACTTGCTCAGGCTGGTCTCAAGATCTGGGTTTTGACTGGAGACAAAATGGAAACTGCAATCAATATAGGATATTCTTGCAGTTTGCTTCGACAAGGAATGAAGCAAATCTGTATAACTTTACCAAATGCAGATGCTACACCTCAGGATCAGAAAGAGGCAAAGAGCTTGTTTAATCAACTCACGAGTGCTTCACATATGGTGAAAACGGAGAAAGACCCACATGCTGCCTACGCATTGATTATCGATGGAAAAACATTAACATATGCCTTAAAGGATGATATGAAGTATCACTTTTTGAGATTAGCCGTTGATTGTGCATCAGTGATTTGTTGTCGTGTCTCACCCAAGCAGAAGGCCTTGGTAACAAGGTTAGTAAAGAAGGGTACAAAGAAGACCACCTTAGCAATTGGTGATGGAGCAAATGATGTTGGTATGATACAAGCAGCTGACATAGGTGTTGGTATCAGTGGTGTTGAAGGCATGCAGGCTGTGATGGCTAGTGATTTCTCCGTCGCGCAGTTTCGCTTCTTGGAGAGGCTATTAGTGGTTCATGGACACTGGTGCTACAAAAGAATAGCTCAGATGATTTGCTATTTCTTCTACAAGAACATAGCATTTGGCCTTACTCTCTTCTACTTTGAGGCATTTGCGGCCTTCTCAGGGCAATCGGTATATGATGACTGGTACATGATATTATTCAATGTCGTCCTGACCTCATTTCCAGTCATTTCACTTGGAGTATTTGAACAAGACGTTTCATCTGAATTCCCTGCATTGTATCAGCAAGGACCGCAAAACTTGTTCTTTGATTGGTATAGAATTTTGGGATGGATGGCCAATGGTCTGTTTACATCTTTAATTGCCTTCTTTGTCAACATCATCATCTTCTGGGAACGAGCATTCCGGGATGGAGGCCAGGTAGCTGACATGGCTGCTGTGGGAACAACAATGTTCACCTGTGTCATCTGGGCTGTCAACTGTCAGATAGCAATAACAATGAGCCATTTCACTTGGATACAACATTTGTTTATCTGGGGTAGCATTGTCACTTGGTACCTCTTACTCTTCATCTATGGTGTCTTGCCTCCTGCATTGTCCAAAAGTGCTTACCAACTCCTTGTTGAAGTTCTTGGCCCTGCACCTGTATATTGGTCAGCCACACTTTTAGTTACAGTCATATGCAACCTTCCATACCTGGCTCTCATTTCCTTTCAGAAATCATTTAATCCCATGGATCATGACATTATTCAAGAGATTAAGTATTACAAGAAGGATGTTGAAGATCAACGCATGTGGACTAGGGAAAGGAGCAAAGCTAGGCAGGAAACAAAGATTGGATTCACTGCAAGTGTGGATGCAAAGATCAGACAGTTGAAAGGAAGATTTCACAAAAAACAATCCTTCATAGATTTTCTTCATAAATCTTCATCATGA 3651 0.4177 MTKGRIRAKLRKSQLYTFGCLGQRPQQHIEPNLLEGPGYSRVVYCNQPTLHKTSNLFYCKNDISTTKYNVITFIPKALFEQFRRVANIYFLLAACLSLTPISPFKAFSMIAPLAFVVGLSMIKEALEDWNRFLQDVKVNRRKVDVHKGNGTFGPRPWQKIEVGDVVKVEKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKPKRCLEVTLPLDNDKIFKDFTGTIRCEDPNPSLYTFVGNLEYDSQVHPLDPSQILLRDSKLRNTSYIYGVAIFGGHDSKVMQNTTKSPSKRSTIEKKMDYIIYLLFTLLLLISLISSIGFAILTKYKAPDWWYLRPDDIDRQYDPKKPALAGFSHLITALILYGYLIPISLYVSIEVVKVLQATFINHDLQMYDEESGVAAEARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGTCPSEVEVAAAKQIAYDLEEQETDLSNFPTPKTSECGSPNNLSELESVITSKAEEESKSAIKGFRFEDRRLMNGNWLKEPNIDVLFLFFRVLAICQTAIPDLNEETGTLTYEAESPDEAAFLVAAKEFGFEFCKRTQSSVSILEKYSPSGQPVEREYKILNLLDFTSKRKRMSVIVRDEEGQIFLLCKGADSIIFDRLSKNGRTFLEGTTKHLNEYGEAGLRTLALAYKKLDEQEYSSWNNEFQKAKTAIGSDREATLEPLADQMERELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYSCSLLRQGMKQICITLPNADATPQDQKEAKSLFNQLTSASHMVKTEKDPHAAYALIIDGKTLTYALKDDMKYHFLRLAVDCASVICCRVSPKQKALVTRLVKKGTKKTTLAIGDGANDVGMIQAADIGVGISGVEGMQAVMASDFSVAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFAAFSGQSVYDDWYMILFNVVLTSFPVISLGVFEQDVSSEFPALYQQGPQNLFFDWYRILGWMANGLFTSLIAFFVNIIIFWERAFRDGGQVADMAAVGTTMFTCVIWAVNCQIAITMSHFTWIQHLFIWGSIVTWYLLLFIYGVLPPALSKSAYQLLVEVLGPAPVYWSATLLVTVICNLPYLALISFQKSFNPMDHDIIQEIKYYKKDVEDQRMWTRERSKARQETKIGFTASVDAKIRQLKGRFHKKQSFIDFLHKSSS* 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00441 1216 NCBIfam phospholipid-translocating P-type ATPase 58 1157 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pte1g00441 1216 FunFam Phospholipid-transporting ATPase 720 915 - -
Pte1g00441 1216 Gene3D - 124 289 - -
Pte1g00441 1216 SUPERFAMILY Calcium ATPase, transduction domain A 149 287 IPR008250 -
Pte1g00441 1216 CDD P-type_ATPase_APLT_Dnf-like 61 1030 - -
Pte1g00441 1216 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 32 1168 - -
Pte1g00441 1216 NCBIfam HAD-IC family P-type ATPase 847 957 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g00441 1216 Gene3D - 420 432 IPR023214 -
Pte1g00441 1216 PRINTS P-type cation-transporting ATPase superfamily signature 875 894 - -
Pte1g00441 1216 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Pte1g00441 1216 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 519 682 IPR023299 GO:0000166
Pte1g00441 1216 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Pte1g00441 1216 Pfam Phospholipid-translocating ATPase N-terminal 43 110 IPR032631 -
Pte1g00441 1216 SFLD Haloacid Dehalogenase 406 926 - -
Pte1g00441 1216 SUPERFAMILY HAD-like 411 919 IPR036412 -
Pte1g00441 1216 Gene3D - 433 468 IPR023299 GO:0000166
Pte1g00441 1216 Gene3D - 585 696 IPR023299 GO:0000166
Pte1g00441 1216 Gene3D - 716 915 IPR023214 -
Pte1g00441 1216 Pfam Phospholipid-translocating P-type ATPase C-terminal 903 1149 IPR032630 -
Pte1g00441 1216 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 1139 IPR023298 -
Pte1g00441 1216 FunFam Phospholipid-transporting ATPase 119 289 - -
Pte1g00441 1216 FunFam Phospholipid-transporting ATPase 587 718 - -
Pte1g00441 1216 Pfam Cation transport ATPase (P-type) 558 647 - -
Pte1g00441 1216 SFLD p-type atpase 406 926 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00441 Pte-Chr1 5003227 5008288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00441 1 1206 Primary Pumps ATPases AT1G17500 73.658 0.0 1856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00441 K01530 - gmx:100819559 1939.85