Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00436 ATGGATGGAAGGCCTAAGTTTCTCCATGGAACAATGGATGCTACCATCTTCAATGCCACACCTCACACGTCCCCATTTCTTTTCAATTGCATAGTACCTAAACCAAAGCCAGCATATGTTACCATCAAGATAGACAACAAGAAAGTGGCACAGACAAGCCGGGAACGTGAACGTGTTTGGAACCAAAGCTTTCAGATTCAATGTGCTCATCCAGCTGACACAACAGTCACTATCTCCTTAAAAGCTTCATACTCCGTATTAGGAAGAATTCACATCAAGGGACATCAGTTGTTGAATGAAGGGTGCTTGATAAATGGTCTCTTCCCTCTTGTTATGGAAAATGATAAACCTCATCCACAGATAAAACTGAGGTTTATATTATGGTTCAAGCCAGCAATGTATGAACCAAGCTGGGAGAAGATACTGAATATAGGGGAGTTTCAAGGGATAAGGAATGCATCATTTCCACTAAGGTCTAGTTGCCAAGTCAAGCTCTACCATGATGCTCACCATTCTTATGCTTTCCAACCTCCCTTAGATTTTTGTGGGGTTCCAAGAAGACTATGGGAAGACATATACAAATCCATTGAAGGGGCTAAGTACATAATCTACATTGCAGGCTGGTCTTTCAACCCCAAGATGGTTCTGGTCAGAGATCCTCAAACTGAACTGCAACATGCATGTGGTGCAACGATTGGTGAGCTATTGAAGAAGAAGGCAGAAGAAGGTGTAGCTGTAAGGATCATGCTATGGAATGATGAAACATCATTGCCTATAATCAAGAACAAAGGTTTGATGAGAACTCATGATGAAGATGCTTTGGCTTATTTCAAAAACACAAATGTTGTCTGCAATTTGTGTGCAAGAGTAAACAAAAAATTCCCGGCAGTCTTCACTCACCATCAGAAAACGATAACGGTGGACACTTGGTCGAAGAATTCTCCAAATGAAAGAGAAATCATGAGTTTTGTTGGGGGGTTAGACCTGTGTGATGGCAGATATGACACTGAGCAACATTCATTGTTCCAAACGTTGAATAGGGAATCACATTGCTATGACTTTTATCAGACTAACATTCATGGAGCTACCCTTGACAAAGGAGGGCCAAGAGTGCCATGGCATGATGCTCATGCATGTATTACTGGTGACGCTGCTTGGGATATCTTGACTAATTTCGAGCAACGATGGACGAAGCAATGCAATCCTTCGTCATTGGTTCCTACTAATGTCATAGCAGACCTCATTCCTCGAAATTTCACAAGCAGTTCTACTGAGAGAAATTGGAAAGTCCAGGTATATAGATCAATTGATCATTCGTCAGCTAATCAATTGTTTGAGACACTGACAGTGGAGCGAAGCATTCATGATGCTTATGTAGAAGCAGTTAGGCGTGCAGATAAGTTTATATACATTGAGAACCAGTACTTCGTTGGTGGGTGTCATTTGTGGGAGGAAGAAAAGCTTTGTGGCTGCAGAAACTTGATCCCCATTGAGATTTCTCTGAAGGTGGTTAATAAGATTAAAGCAAAGGAGAGATTTGCTGTGTACATTGTAATACCAATGTGGCCAGAAGGAACACCTGACAGCGAAACCGTTCAGGACATATTGCATTGGACAAGGGAAACAATGGAAATGATGTATAGGTTGATAGGTGAAGCCATAAAAGAAAGTGGTGAGCCAGGGCATCCAAGGGACTACTTGAATTTCTTTTGCCTTGCAAACAGGGAGGTGAAGGGGAGAGGAGAGTTCATCCCACCATACTCGCCTCATATTGAAACTCAGTATTGGAGAGCTCAAAAGCATAGGAGATTCATGGTGTATGTTCACTCAAAGCTCATGATAGTGGACGACCTATACATTCTGATTGGTTCAGCTAATGTGAATCAGAGATCAATGGATGGGACAAGGGACACTGAGATTGCAGTAGGATGCTATCAATGTAACAATATTGAAGATGAGAGTGTTATGACACGTGGTGACATTCATGCCTATAGAATGTCTCTATGGCATGAGCACACCAGAGTAGCTGATCAATGTTTCCTTGAGCCTCAGAGCTTGGGATGTGTGGCGACAATGCGTTCACTAGGAGATGAGATGTGGAAAATATACAGCAATGAGGAAGTTATGGACATGGAAGGCGTACACCTAGTTGCATACCCAGTGAATATTACACAAGAAGGTTATGTGGAAGACCTTACAGATTTTGGTGGTCATTTTCCCGACACTAGAACTCCAGTCAAAGGGAGGAGGTCAAAGGTGTTGCCTCCTATACTCACAACCTGA 2283 0.4231 MDGRPKFLHGTMDATIFNATPHTSPFLFNCIVPKPKPAYVTIKIDNKKVAQTSRERERVWNQSFQIQCAHPADTTVTISLKASYSVLGRIHIKGHQLLNEGCLINGLFPLVMENDKPHPQIKLRFILWFKPAMYEPSWEKILNIGEFQGIRNASFPLRSSCQVKLYHDAHHSYAFQPPLDFCGVPRRLWEDIYKSIEGAKYIIYIAGWSFNPKMVLVRDPQTELQHACGATIGELLKKKAEEGVAVRIMLWNDETSLPIIKNKGLMRTHDEDALAYFKNTNVVCNLCARVNKKFPAVFTHHQKTITVDTWSKNSPNEREIMSFVGGLDLCDGRYDTEQHSLFQTLNRESHCYDFYQTNIHGATLDKGGPRVPWHDAHACITGDAAWDILTNFEQRWTKQCNPSSLVPTNVIADLIPRNFTSSSTERNWKVQVYRSIDHSSANQLFETLTVERSIHDAYVEAVRRADKFIYIENQYFVGGCHLWEEEKLCGCRNLIPIEISLKVVNKIKAKERFAVYIVIPMWPEGTPDSETVQDILHWTRETMEMMYRLIGEAIKESGEPGHPRDYLNFFCLANREVKGRGEFIPPYSPHIETQYWRAQKHRRFMVYVHSKLMIVDDLYILIGSANVNQRSMDGTRDTEIAVGCYQCNNIEDESVMTRGDIHAYRMSLWHEHTRVADQCFLEPQSLGCVATMRSLGDEMWKIYSNEEVMDMEGVHLVAYPVNITQEGYVEDLTDFGGHFPDTRTPVKGRRSKVLPPILTT* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00436 760 SMART pld_4 296 333 IPR001736 GO:0003824
Pte1g00436 760 SMART pld_4 604 631 IPR001736 GO:0003824
Pte1g00436 760 Pfam Phospholipase D C terminal 677 749 IPR024632 -
Pte1g00436 760 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 604 631 IPR001736 GO:0003824
Pte1g00436 760 Pfam C2 domain 36 100 IPR000008 -
Pte1g00436 760 SUPERFAMILY Phospholipase D/nuclease 150 402 - -
Pte1g00436 760 Gene3D Endonuclease Chain A 181 427 - -
Pte1g00436 760 PANTHER PHOSPHOLIPASE D 8 742 IPR015679 -
Pte1g00436 760 Pfam Phospholipase D Active site motif 607 631 IPR001736 GO:0003824
Pte1g00436 760 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 33 125 IPR035892 -
Pte1g00436 760 PIRSF PLD_plant 6 760 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pte1g00436 760 Gene3D Endonuclease Chain A 440 653 - -
Pte1g00436 760 SUPERFAMILY Phospholipase D/nuclease 418 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00436 Pte-Chr1 4737441 4740705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00436 30 761 Phospholipase D Gene Family (Wang group) AT1G55180 61.611 0.0 947
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00436 K01115 - qsa:O6P43_018294 1207.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00436 1 4737441 4740705 Pte1g00436 1 4737441 4740705 RCT