Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00434 ATGAAACGAGGAAACCAAGAGAAAGGATCAGAAAGCGCTGAGAAGGTTGTAGTTGCTGTTAAGGCTTCCAAGGAAATTCCAAAGACTGCTCTTGTGTGGGCTTTGACTCATGTTGTTCAACCAGGTGATCTCATTACACTGCTGGTTGTAGTCCCTTCTCAGAGTTCAGGTAGAAAGTGGGGTTTTCCAAGATTTGCTGGGGACTGTGCTAGTGGTTACAAAAAGTCTCATGCAGAAGCAACTTCAGAGCAGAATTGTGATATCACAGATTCTTGTTCGCAGATGATCCTTCAACTTCATGATGTTTATGATCCAAACAAGATCAATGTCAACATAAAAATTGTCTCAGGTTCACCTTGTGGATCTGTAGCTGCAGAGGCCAAGAAAGGTCAAGCCAGTTGGGTTGTATTAGACAAACAGCTCAGGCATGAGGAAAAGCGATGCATGGAAGAGCTGCATTGCAATATTGTGGTTATGAAGCGCTCCCAACCTAAAGTTCTGCGTCTGAATCTAATTGGATCATCCAAGAAAGATCTTGAAGAAGCAGGTCCCCCCTTGGATCAGGAGGAAACTTCTGGAAAACAAACCAAAACAAAAAATGATTTCGCAGATCGTATAAAAGGACCAGCTGTTACCCCATCAAGTAGTCCTGAATCAGGGACAGCATTCACTATAACTGAAGCAGGTACTTCGTCCGTATCAAGTTCAGACCCAGGAACTTCGCCATTTTTTATTTCAGTGGTGCATGCTGACTTGAAGAAAGAGGAAGCTATACAGGAAAATAAAGACCTTGATGATACAAATTCGGATACCGACAGTGAAAACCTATCAGCATCTTCAGCAAGCTTGAGATTCCACCCCTGGGTTGCAGAGTTAGTTTCACAGCAGTCTTCCTTGCAAAACATGAAAGAAAGGTTCGAAAGATTTGATGGTAAGTCCTCGGCATCTGCAGCCAAGGGTTTTCCAGACAAGTTCTCCAGCATAGACAGGGATGCTGAAAGTGGAACTCCAAGCTGTAGAATGGAAGTCGATTTCAGTGGCAACTTAAGAGACGCAATATCTTTTTCCAGAAATACACCTCCTGGCCCTCCTCCATTGTGTTCAATATGTCAGCATAAGGCACCAGTCTTTGGTAAACCTCCTCGATGGTTCACCTATGCCGAGTTGGAGTTTGCCACCGGTGGTTTTTCGCAAGCAAACTTCTTAGCAGAGGGAGGATTTGGATCCGTTCACAGAGGGGTCTTACTTGATGGTCAAGTAGTTGCTGTGAAGCAACATAAGTTGGCTAGTTCTCAAGGGGATCTTGAATTTTGCTCAGAAGTGGAAGTTTTAAGCTGTGCACAGCACAGAAATGTTGTCATGCTGATTGGATTCTGTATAGAAGATGGTAGAAGATTATTGGTTTATGAATTTATATGCAATGGTTCACTGGATACACATCTATATGGGCTGTATCAGGAGCCACTGGAGTGGTCTGCACGACAAAAAATTGCAATTGGTGCTGCTCGAGGGCTGCGATATCTTCATGAGGAATGCAGAGTTGGTTGCATTGTACATAGGGACTTGCGGCCTAACAACATTCTTATCACCCATGATTTTCAGCCATTGGTTGGTGATTTTGGCTTGGCGAGATGGCAACCAGATGGAGACACAGGAGTAGAAACTAGAGTAATTGGAACATTTGGATACTTGGCCCCAGAATATACTCAGAGTGGCCAAATTACTGAAAAAGCTGATGTTTATTCATTTGGGGTGGTATTGGTTGAACTTGTCACTGGAAGGAAAGCAGTTGATCTAAACCGACCAAAGGGCCAGCAGTGTCTTACGGAGTGGGCACGTCCTCTGTTGGAAGAATATGCTATTGGGGAACTGGTTGATCCAAGGTTGGGAGATCGCTATTCAGAACACGAAGTGTGTTGCATGCTTCATGCAGCATCCTTATGTATAAGACGTGATCCTCATTCCAGGCCTCGCATGTCACAGGTCCTTCGGATTTTAGAAGGTGACATGGTCATGGACTTCATGTCAACCCCAAGTTATGAAGTTGGGAACAGGAGTGGTAGAATTTGGACAGATGAGCAGAAGCATCACCACAGTGTTCCCCTGCTAGATGAAACAGTAGAGGCTTTTAGTGGGAAACTATCTATCGAGAAACACACGAAGCCTGCCAACTGGCAAAGAGACAGGGCAGGGCAGACATCTTGTGAACATGATGTCTAA 2220 0.4441 MKRGNQEKGSESAEKVVVAVKASKEIPKTALVWALTHVVQPGDLITLLVVVPSQSSGRKWGFPRFAGDCASGYKKSHAEATSEQNCDITDSCSQMILQLHDVYDPNKINVNIKIVSGSPCGSVAAEAKKGQASWVVLDKQLRHEEKRCMEELHCNIVVMKRSQPKVLRLNLIGSSKKDLEEAGPPLDQEETSGKQTKTKNDFADRIKGPAVTPSSSPESGTAFTITEAGTSSVSSSDPGTSPFFISVVHADLKKEEAIQENKDLDDTNSDTDSENLSASSASLRFHPWVAELVSQQSSLQNMKERFERFDGKSSASAAKGFPDKFSSIDRDAESGTPSCRMEVDFSGNLRDAISFSRNTPPGPPPLCSICQHKAPVFGKPPRWFTYAELEFATGGFSQANFLAEGGFGSVHRGVLLDGQVVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDGRRLLVYEFICNGSLDTHLYGLYQEPLEWSARQKIAIGAARGLRYLHEECRVGCIVHRDLRPNNILITHDFQPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYTQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIGELVDPRLGDRYSEHEVCCMLHAASLCIRRDPHSRPRMSQVLRILEGDMVMDFMSTPSYEVGNRSGRIWTDEQKHHHSVPLLDETVEAFSGKLSIEKHTKPANWQRDRAGQTSCEHDV* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00434 739 CDD STKc_IRAK 402 668 - -
Pte1g00434 739 SUPERFAMILY Protein kinase-like (PK-like) 380 680 IPR011009 -
Pte1g00434 739 MobiDBLite consensus disorder prediction 177 222 - -
Pte1g00434 739 FunFam Dual-specific kinase DSK1-like 7 160 - -
Pte1g00434 739 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 472 675 - -
Pte1g00434 739 ProSiteProfiles Protein kinase domain profile. 396 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00434 739 Gene3D Phosphorylase Kinase; domain 1 368 471 - -
Pte1g00434 739 ProSitePatterns Tyrosine protein kinases specific active-site signature. 517 529 IPR008266 GO:0004672|GO:0006468
Pte1g00434 739 Gene3D HUPs 2 160 IPR014729 -
Pte1g00434 739 Gene3D Transferase(Phosphotransferase) domain 1 472 678 - -
Pte1g00434 739 Coils Coil 254 274 - -
Pte1g00434 739 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 368 471 - -
Pte1g00434 739 PANTHER OS01G0750732 PROTEIN 213 673 - -
Pte1g00434 739 SMART tyrkin_6 396 666 IPR020635 GO:0004713|GO:0006468
Pte1g00434 739 Pfam Protein tyrosine and serine/threonine kinase 400 665 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00434 Pte-Chr1 4726387 4731243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00434 376 724 Trihelix Transcription Factor Family AT1G70460 47.075 6.84e-98 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pte1g00434 PK_Tyr_Ser-Thr 1.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00434 - - qsa:O6P43_018291 1155.97