Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00426 ATGGCTACTGTACCAGGACAATTAATTTGGGAGATAGTGAAGAAGAACAACTGTTTTTTGGTAAAGCAGTTTGGTGATGGGACTGCTAAAGTTCAGTTCAGCAAAGAGAGCAACAATCTCTACAATCGCCACTCCTACAAATACTCTGGTTTGGCAAATAAGAAAACTGTAACCATTCAACCCCTTGGTAAGGACCAATCTGTGTTGCTTGCAACCACTAAGACTAAAAAGCAAAGCAATCCATCAGCTCTTCTGCACAAATCTGTCATGAAGAAGGAGTTCAACCGAATGGCTAAGGCAGTTTCAAATCAGGTTGCTGATAACGACTATAGGCCAGACCTCAAGAAGGCAGCCCTTGCAAGGTTGAGCGCTGTCCATAGAAGCTTGAAAGTTGCCAAGTCGGGTGTGAAAAAGAGAAACAGGCAGGTTTTGAAGATCCGTGGTAGGAAATGA 453 0.4327 MATVPGQLIWEIVKKNNCFLVKQFGDGTAKVQFSKESNNLYNRHSYKYSGLANKKTVTIQPLGKDQSVLLATTKTKKQSNPSALLHKSVMKKEFNRMAKAVSNQVADNDYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQVLKIRGRK* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00426 150 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
Pte1g00426 150 FunFam 60S ribosomal protein L28 5 133 - -
Pte1g00426 150 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Pte1g00426 150 Gene3D - 6 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00426 Pte-Chr1 4587524 4589253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00426 1 142 Cytoplasmic Ribosomal Protein Gene Family AT2G19730 76.056 3.01e-76 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00426 K02903 - jre:109007896 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00426 1 4587524 4589253 Pte1g00426 1 4587524 4589253 RCT