Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00422 ATGGCAAGCAACTCACTGAATCACGCTCTAGCAACCCTTTTGATATTTGCCATGGTGATGACTTCTAATTGCTTACGATGTGATGCTGCAAGTCCAGGAGTAGATGTGGGGAACAATGATTATCTACCAACACTTTTCAAAGCAAATTACCCTCCTTACGGGAGGGACTTTTTCAACCACGTACCCACTGGAAGATTTTGCAATAGGAAATTGGCAACTGATATAACTGCTGAAACCTTGGGCTTCAAGGCTTATGCCCATGCATATCTAAGTCCACAAGCAACGGGCAAGAACCTTCTTACAGGAGCTAACTTCGCCTCTGCTGGCTCAGGTTATGATGAGAAAGCAGCCAATTTAAATCATGTGATATCATTGCCTCAGCAACTAAATTATTTCGGTGATTACCAAAACAAGCTGGAAGAGGTTGCTGGTAGCCAGAAAGCAGCATCGATTGTCAAGGATGCACTGTATATTCTGAGTGCTGGCAGCAGTGACTTTCTGCAGAACTACTACGTCAATTCCTTAGTCAACGAAGTCTATACTCCTGACGAGCATCACTAA 561 0.4367 MASNSLNHALATLLIFAMVMTSNCLRCDAASPGVDVGNNDYLPTLFKANYPPYGRDFFNHVPTGRFCNRKLATDITAETLGFKAYAHAYLSPQATGKNLLTGANFASAGSGYDEKAANLNHVISLPQQLNYFGDYQNKLEEVAGSQKAASIVKDALYILSAGSSDFLQNYYVNSLVNEVYTPDEHH* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00422 186 Gene3D SGNH hydrolase 33 183 IPR036514 -
Pte1g00422 186 PANTHER GDSL ESTERASE/LIPASE EXL3 34 182 - -
Pte1g00422 186 Pfam GDSL-like Lipase/Acylhydrolase 35 174 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00422 Pte-Chr1 4565172 4572837 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00422 34 171 Pollen Coat Proteome AT1G75910 39.855 8.86e-26 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00422 - - fve:101298910 258.84