Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00416 ATGGGCAAAGCTGCAAGGTGGCTCAAAGGCTTGTTGGGGATGAAGAAAGAGAAGGAAAAAGAAAAGTTTGATAATTCAAGCTTTGGTGGCAATGGCAAGAGAGACAATAGAAGATGGAGTTTTGCCAAGTCAGCCAAAGATTCAGCTTCTCTAGGTCATAGTCAAACCCCAGTAAAAGTTCAGTCTTCTGTTTCAGCTTCTGATACTGATTGGCTGACATCTTACGTTACTGAAAATGAGAAAGAACAGAACAAGCACGCAATTGCTGTAGCTGCTGCTACGGCGGCTGCCGCCGATGCTGCTGTAGCGGCAGCCCAAGCTGCTGTTGCTGTGGTTAGATTGACAAGTCAAGGCAGAGGTGCTCTGTTCAGTAGGAGCAGAGAGAAGTTGGCTGCAGTGAAAATTCAAACTATGTTCAGAGGTTTTCTGGCACGAAAAGCACTGCGAGCCTTGAAGGCACTTGTGAAATTGCAGTCACTTGTGAGAGGCTATCTGGTTCGAAAGCGAACTGCTGCAACTCTCTATAGCATGCAGGCACTGATAAGAGCACAAACTGCTGTCAAAAACCAAAGAGCTAGTCGTTCATTAACCAAAGAACAGAGATTTCATCCTAGGAAGTCCTATGAAAGTTTTGATGAAGCAAGAAGTGAATTCCACAGTCAAAGGGTCAGTGCATTTCCCGAAGTTGCCTTCATTGAAAGCCCAAAAATTGTTGAAATTGACACGTACAAGACAAGACGGTGGTCGTCTAGGCGCATCAGCAGCAACAACACTTTGTCTGAATACGATGAAGATGACACTTACAATCAACCCCCACTTCCTTGTTCAGATTTCAAGCAGTTTCATCAAGATTTTGAATGGTACTTAAATGGAGATGAATGCAAATTCTCTACTGCACAAAGCACTCCTCGTTTTGGCAGCTTTGTGAGGTCAAATGCTCCTCCTACACCAGCCAAGAGTGTTTGTGGAGACAGTTTCTTCCGTCCTTACTCTAATGCCCCAAATTACATGGCTGACACAAAATCCTTCAAAGCAAAACTGAGGTCTCTTAGTGCACCAAAACAAAGACCAGAGCCAGGTCCTAAGAAAGTGGCCCTTCAGGAATTCATGGCAGCAAGAAACAGCATAAGTGGTGTCAGAATGCAACGTTCCCCACACACGCATGTTCGAGAGTCTTTGAATTATTGA 1188 0.4461 MGKAARWLKGLLGMKKEKEKEKFDNSSFGGNGKRDNRRWSFAKSAKDSASLGHSQTPVKVQSSVSASDTDWLTSYVTENEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGALFSRSREKLAAVKIQTMFRGFLARKALRALKALVKLQSLVRGYLVRKRTAATLYSMQALIRAQTAVKNQRASRSLTKEQRFHPRKSYESFDEARSEFHSQRVSAFPEVAFIESPKIVEIDTYKTRRWSSRRISSNNTLSEYDEDDTYNQPPLPCSDFKQFHQDFEWYLNGDECKFSTAQSTPRFGSFVRSNAPPTPAKSVCGDSFFRPYSNAPNYMADTKSFKAKLRSLSAPKQRPEPGPKKVALQEFMAARNSISGVRMQRSPHTHVRESLNY* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00416 395 MobiDBLite consensus disorder prediction 18 62 - -
Pte1g00416 395 MobiDBLite consensus disorder prediction 47 62 - -
Pte1g00416 395 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 170 IPR027417 -
Pte1g00416 395 Pfam Protein of unknown function (DUF4005) 303 377 IPR025064 -
Pte1g00416 395 Gene3D - 125 175 - -
Pte1g00416 395 ProSiteProfiles IQ motif profile. 152 179 IPR000048 GO:0005515
Pte1g00416 395 SMART iq_5 150 171 IPR000048 GO:0005515
Pte1g00416 395 SMART iq_5 127 149 IPR000048 GO:0005515
Pte1g00416 395 PANTHER IQ-DOMAIN 5-RELATED 1 367 - -
Pte1g00416 395 Pfam IQ calmodulin-binding motif 152 169 IPR000048 GO:0005515
Pte1g00416 395 Pfam IQ calmodulin-binding motif 131 149 IPR000048 GO:0005515
Pte1g00416 395 ProSiteProfiles IQ motif profile. 128 156 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00416 Pte-Chr1 4519116 4521280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00416 1 381 IQD Protein Family AT3G16490 53.401 3.96e-103 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00416 - - jre:108985053 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00416 1 4519116 4521280 Pte1g00416 1 4519116 4521280 RCT