Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00405 ATGGCATCACGTTTCTGTTTACTAATAAGTATTTTCATCGTTTTTCTGACTGTTGCAAATTTTTGTGCTGAAGCGACCAGAGAATTTGAAGTTGGAGATGAATTTGGTTGGCGTGAACCAGAGCTTAAAAACTCTACAATGTATATTGAATGGGCTGAGAGGAACAGATTTCAAATTGGAGATACTCTTCATTTTGACTACAAGAATAATGATTCTATTCTCATGGTTGACAAATGGGATTACTACAACTGCAGCACAAGCAATTACATAGCTGCCTTCAACAATGGAAATAGCACCTTCAAGCTTAACAGATCCGGCCCTTTCTACTTCATTAGTGGAAAAGTGGGTCATTGCAAAAATGGTCAAAGGTTGCTAGTGGATGTCATGTCCATTCATACCCCTCATTATCATTCTCCACCATCCATTTCTCTTCCTCCTGATGAATCCGTTTCAGCCATGGCTCCTGCTCCCCTTTCAACTTCAGCAGCATCCATTCCAGCGGTTAATCCTTCAAACATGATGGCTATGTCTGTGACATTTGTAACCACCAAGACTTCATTGCAATGGAATGAAGCACCCAAGGATGAACCAATCTGCGTCTGA 603 0.408 MASRFCLLISIFIVFLTVANFCAEATREFEVGDEFGWREPELKNSTMYIEWAERNRFQIGDTLHFDYKNNDSILMVDKWDYYNCSTSNYIAAFNNGNSTFKLNRSGPFYFISGKVGHCKNGQRLLVDVMSIHTPHYHSPPSISLPPDESVSAMAPAPLSTSAASIPAVNPSNMMAMSVTFVTTKTSLQWNEAPKDEPICV* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00405 200 CDD OsENODL1_like 27 129 IPR041846 -
Pte1g00405 200 Gene3D - 26 137 IPR008972 -
Pte1g00405 200 PANTHER BLUE COPPER PROTEIN 26 159 IPR039391 GO:0009055
Pte1g00405 200 Pfam Plastocyanin-like domain 46 122 IPR003245 GO:0009055
Pte1g00405 200 SUPERFAMILY Cupredoxins 28 129 IPR008972 -
Pte1g00405 200 ProSiteProfiles Phytocyanin domain profile. 27 130 IPR003245 GO:0009055
Pte1g00405 200 FunFam Early nodulin-like protein 1 26 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00405 Pte-Chr1 4404443 4405708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00405 7 143 Phytocyanin Superfamily AT1G79800 53.571 1.94e-47 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00405 - - qsa:O6P43_018196 202.601