Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00395 ATGGCTGGAAACCCTAACTGGTGGAATATCTATTCACCATCACTAATTTCTCCTCAGTCTGTTCTTGGATCTTCTTCGGTTTCTTCGAGTTCTCTGACAGACAACCAAAATACTCCACATTCATGGAGCCAAATGCTAATGACTGGATTACCCAACGAAGAAGATAGGATAGTTCCTAGCTATTTTCCAACAAAGAAGTTTGAGAATTGGGAAGATCAAATTCTTAATCCAGCAGCCACAAGATTTCCTGTTCTTGATGTAATAAAGCAAGAAGTTTCACATAGTAACAACAGCTTGTACGTCCTTGGACACGAAGAATTTCAGGCATCTGGACCTGTACTATGGTCACAGTCACAAATCATGCCAGTTTCTTCACCTACGTCTTGTGTCACCAGCTTAAGTAATACTAATAGCATATTTGATTTCACTGAAAACAAGGCATGTAAGAGAAACCAGCTAACATATCACACATCTGAGTGTAACAGCACGGCTACTGCTTCAGTCTGCAAGAAACCTAGGGTCCTAAATTCTAGCCAGCCACCTCTAAAGCTGCGCAAGGAGAAGCTAGGAGATAGAATAACTGCACTACACCAGCTTGTATCGCCATTCGGAAAGACTGACACGGCTTCTGTCTTGATGGAAGCCATTGGATATATAAGATTCCTTCTTGGTCAAATCGAGGCACTCACTTCTCCTTATGTTGTTAATACATCAAAAAACATAAGGAGTCAGCAATATATCCATGGTGAGGGGAACTGTATATTCCCTGAAGACCCAGGTCAGTTATTGAATGACACATATCCTGAAAGAAAAGGAGCTCCGAACCGGGATACTCAAGGGAAAACAAAGGACCTGAGGAGTAGAGGATTGAGCTTGGTTCCTGTGTCATGCACTGAAAATGTTGTGGGTGTAAATGGAGCTGATTACTGGGCACCACCTTATGGTGGTGGGTTTTGA 957 0.4232 MAGNPNWWNIYSPSLISPQSVLGSSSVSSSSLTDNQNTPHSWSQMLMTGLPNEEDRIVPSYFPTKKFENWEDQILNPAATRFPVLDVIKQEVSHSNNSLYVLGHEEFQASGPVLWSQSQIMPVSSPTSCVTSLSNTNSIFDFTENKACKRNQLTYHTSECNSTATASVCKKPRVLNSSQPPLKLRKEKLGDRITALHQLVSPFGKTDTASVLMEAIGYIRFLLGQIEALTSPYVVNTSKNIRSQQYIHGEGNCIFPEDPGQLLNDTYPERKGAPNRDTQGKTKDLRSRGLSLVPVSCTENVVGVNGADYWAPPYGGGF* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00395 318 MobiDBLite consensus disorder prediction 264 285 - -
Pte1g00395 318 CDD bHLH_AtbHLH_like 183 229 IPR045239 -
Pte1g00395 318 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 173 222 IPR011598 GO:0046983
Pte1g00395 318 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 40 300 - -
Pte1g00395 318 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 183 234 IPR036638 GO:0046983
Pte1g00395 318 MobiDBLite consensus disorder prediction 270 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00395 Pte-Chr1 4333697 4336766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00395 66 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 48.058 1.40e-41 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00395 - - qsa:O6P43_018179 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00395 1 4333697 4336766 Pte1g00395 1 4333697 4336766 RCT