Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00385 ATGAGCGGAGTTGGAAGACAGGGGCAGAGATCTGGTGCTAACGGAGTACAGGTGCATCATCAGAGGCAGTACTCTGACAACTTTTTGGACAGTTCGTCCAATGGGAGATGGCTTCAGTCGGCTGGTCTTCAACACCTTCAATCGTCTTCTTATGGTTCTATTCCTCAACTTCAGGACTATAACTTCTACAGTGGAGTTGGAGGAGGGCAGGCAGGTAGAATGTTCAGGAATTTGCAGAGGGGCTTTAATGGAGGAAATGACTACTACATGGAACCTACTACGCCTCCTGGGAATTCGCATTCATCAAGTCAGAAGAAGAATGGAGAAGATTCACCTAGTGATTATAGTCCTGGGCTTTTGGATCTCCATTCCTTTGATACTGAACTTATTCCTGAGATGCCAGTTAGAAACAGAAGCTCTGATGATGCTGAGCCTTATATTTCAAACAAACAGACAGCCAAAGCTCGGGCTTATCCTGAAAACAACCTACTGAGAAGTACTCCTGCAGATAAAGAGAAATCTAATTTAGTTGCAAAAATAAAAGTTGTGGTACGCAAGAGACCACTCAACAAAAAAGAGTTAGCAAAGAATGAGGAAGATATTATTGAGACCCATTCCAATGCTATGACTGTACATGAGACCAAACTTAAGGTTGACCTGACTGAATATGTGGAGAAGCATGAATTTGTATTTGATGCTGTTCTAAATGAAGAAGTTTCAAATGATGAGGTATATCGGGAGACAGTTGAGCCCATTGTTCCATTGATCTTTCAACGGACTAAAGCGACGTGCTTTGCTTATGGACAAACAGGGAGTGGAAAAACTTTCACTATGAAGCCACTGCCTCTTAAAGCATCAAGGGACATCTTCAGATTGATGTATTATACTTACAGAAACCAAGGATTCCAGTTGTTTGTGAGTTTCTTTGAAATATACGGTGGAAAACTGTTTGATCTTCTAAGTGACCGAAAGAAGCTCTGCATGAGGGAGGATGGTAAGCAGCAAGTCTGCATTGTGGGTTTGCAGGAATATAAAGTATCAGATGTAGAGACAATCAAGGAGCTCATAGAGAGAGGGAACGCCACAAGAAGTACTGGGACCACAGGTGCAAATGAGGAATCTTCCCGGTCACATGCAATTCTTCAGCTTGCTATCAAGAGGTCAGCTGATGGCAATGAGTCCAAACCTCCACGTTTAGTTGGCAAGCTATCCTTCATTGATCTTGCCGGAAGTGAACGAGGAGCAGATACTACAGATAATGACAAACAGACAAGAATGGAAGGTGCTGAGATCAACAAGAGCTTGCTTGCGCTGAAAGAATGCATAAGGGCTCTTGACAATGACCAGGGACACATCCCTTTCAGGGGCAGTAAATTAACTGAAGTTTTGAGGGATTCATTTGTCGGAAATTCACGTACTGTTATGATATCATGCATATCCCCTAGTTCTGGTTCATGCGAGCACACTCTCAACACGTTAAGATATGCTGACAGGGTCAAGAGTCTGTCAAAAGGAAACAATACGAAGAAGGAGATATTACCTTCGAACTCTAACATGAAGGAATCAACTACCATTCCCTTATCTTCAGTAAGTTCATCTGTTTACGATGATAATACTGCTGGTACATGGCCTGAACAAAATGAAGGAGACGATTTTAGTCCATCGGAAGAGTCATTTGAACAAATGAAACCAGCCTCGAAGAAGAGTGGAAAGCTAGAGCCACAGTATAATTCCATTGTGGAGGACAAATTAAGAAAACCTTATAGTCAGGCAAAATGGAAGGACCTGCCAAAACCTGAATCTAAAATTGTACATTCAGATGACGACTTGAGTGCCCTCTTACAGGAGGAGGAAGATCTTGTAAATGCTCATCGAAAACAAGTAGAGGAGACTATGAATATCGTTAGAGAGGAGATGAGCCTCTTGGTTGAAGCTGATCAGCCGGGGAATCAGCTGGATGATTATGTCACAAGATTGAATGCCATTCTATCTCAGAAGGCTGCTGGCATCCTACAACTGCAAACCCGTTTGGCTCATTTCCAGAAGCGTCTGAAGGAGCACAATGTGTTAATAACATCTTCTGGATACTGA 2091 0.4256 MSGVGRQGQRSGANGVQVHHQRQYSDNFLDSSSNGRWLQSAGLQHLQSSSYGSIPQLQDYNFYSGVGGGQAGRMFRNLQRGFNGGNDYYMEPTTPPGNSHSSSQKKNGEDSPSDYSPGLLDLHSFDTELIPEMPVRNRSSDDAEPYISNKQTAKARAYPENNLLRSTPADKEKSNLVAKIKVVVRKRPLNKKELAKNEEDIIETHSNAMTVHETKLKVDLTEYVEKHEFVFDAVLNEEVSNDEVYRETVEPIVPLIFQRTKATCFAYGQTGSGKTFTMKPLPLKASRDIFRLMYYTYRNQGFQLFVSFFEIYGGKLFDLLSDRKKLCMREDGKQQVCIVGLQEYKVSDVETIKELIERGNATRSTGTTGANEESSRSHAILQLAIKRSADGNESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNTKKEILPSNSNMKESTTIPLSSVSSSVYDDNTAGTWPEQNEGDDFSPSEESFEQMKPASKKSGKLEPQYNSIVEDKLRKPYSQAKWKDLPKPESKIVHSDDDLSALLQEEEDLVNAHRKQVEETMNIVREEMSLLVEADQPGNQLDDYVTRLNAILSQKAAGILQLQTRLAHFQKRLKEHNVLITSSGY* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00385 696 MobiDBLite consensus disorder prediction 85 121 - -
Pte1g00385 696 Pfam Kinesin motor domain 185 501 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte1g00385 696 MobiDBLite consensus disorder prediction 506 549 - -
Pte1g00385 696 FunFam Kinesin-like protein 160 505 - -
Pte1g00385 696 SMART kinesin_4 177 508 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte1g00385 696 ProSiteProfiles Kinesin motor domain profile. 179 502 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte1g00385 696 MobiDBLite consensus disorder prediction 1 31 - -
Pte1g00385 696 MobiDBLite consensus disorder prediction 506 574 - -
Pte1g00385 696 PANTHER KINESIN-RELATED PROTEIN 6 32 546 IPR027640 GO:0003777|GO:0007018
Pte1g00385 696 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 502 IPR027417 -
Pte1g00385 696 Coils Coil 614 634 - -
Pte1g00385 696 PRINTS Kinesin heavy chain signature 452 473 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte1g00385 696 PRINTS Kinesin heavy chain signature 259 280 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte1g00385 696 PRINTS Kinesin heavy chain signature 402 420 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte1g00385 696 PRINTS Kinesin heavy chain signature 368 385 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte1g00385 696 CDD KISc_KIF2_like 179 500 - -
Pte1g00385 696 ProSitePatterns Kinesin motor domain signature. 401 412 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pte1g00385 696 Gene3D Kinesin motor domain 155 505 IPR036961 -
Pte1g00385 696 MobiDBLite consensus disorder prediction 92 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00385 Pte-Chr1 4276517 4281974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00385 175 502 Calmodulin-binding Proteins AT5G65930 34.911 7.05e-46 174